Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC3104293349;93350;93351 chr2:178548502;178548501;178548500chr2:179413229;179413228;179413227
N2AB2940188426;88427;88428 chr2:178548502;178548501;178548500chr2:179413229;179413228;179413227
N2A2847485645;85646;85647 chr2:178548502;178548501;178548500chr2:179413229;179413228;179413227
N2B2197766154;66155;66156 chr2:178548502;178548501;178548500chr2:179413229;179413228;179413227
Novex-12210266529;66530;66531 chr2:178548502;178548501;178548500chr2:179413229;179413228;179413227
Novex-22216966730;66731;66732 chr2:178548502;178548501;178548500chr2:179413229;179413228;179413227
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTT
  • RefSeq wild type template codon: GAA
  • Domain: Fn3-114
  • Domain position: 27
  • Structural Position: 29
  • Q(SASA): 0.6494
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/P rs1575474263 None 0.995 N 0.595 0.422 0.754779769779 gnomAD-4.0.0 1.36835E-06 None None None None I None 0 0 None 0 0 None 0 0 1.79888E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.2342 likely_benign 0.2215 benign -0.496 Destabilizing 0.919 D 0.444 neutral None None None None I
L/C 0.4688 ambiguous 0.4578 ambiguous -0.632 Destabilizing 0.999 D 0.497 neutral None None None None I
L/D 0.5641 likely_pathogenic 0.5234 ambiguous -0.031 Destabilizing 0.851 D 0.54 neutral None None None None I
L/E 0.335 likely_benign 0.3249 benign -0.121 Destabilizing 0.919 D 0.528 neutral None None None None I
L/F 0.1455 likely_benign 0.1291 benign -0.542 Destabilizing 0.995 D 0.405 neutral N 0.437014998 None None I
L/G 0.5027 ambiguous 0.4658 ambiguous -0.646 Destabilizing 0.851 D 0.519 neutral None None None None I
L/H 0.1582 likely_benign 0.1463 benign 0.009 Stabilizing 0.984 D 0.577 neutral N 0.426414003 None None I
L/I 0.0948 likely_benign 0.0981 benign -0.225 Destabilizing 0.982 D 0.42 neutral N 0.361325161 None None I
L/K 0.3189 likely_benign 0.3063 benign -0.257 Destabilizing 0.919 D 0.524 neutral None None None None I
L/M 0.1182 likely_benign 0.1146 benign -0.383 Destabilizing 0.996 D 0.423 neutral None None None None I
L/N 0.2126 likely_benign 0.2004 benign -0.067 Destabilizing 0.015 N 0.282 neutral None None None None I
L/P 0.6352 likely_pathogenic 0.605 pathogenic -0.283 Destabilizing 0.995 D 0.595 neutral N 0.450656299 None None I
L/Q 0.1305 likely_benign 0.124 benign -0.263 Destabilizing 0.988 D 0.575 neutral None None None None I
L/R 0.2197 likely_benign 0.2124 benign 0.234 Stabilizing 0.968 D 0.5 neutral N 0.431627821 None None I
L/S 0.2283 likely_benign 0.206 benign -0.515 Destabilizing 0.851 D 0.512 neutral None None None None I
L/T 0.1922 likely_benign 0.1784 benign -0.494 Destabilizing 0.919 D 0.463 neutral None None None None I
L/V 0.1027 likely_benign 0.1068 benign -0.283 Destabilizing 0.946 D 0.456 neutral N 0.404518578 None None I
L/W 0.2319 likely_benign 0.2033 benign -0.567 Destabilizing 0.999 D 0.659 neutral None None None None I
L/Y 0.2842 likely_benign 0.2563 benign -0.31 Destabilizing 0.996 D 0.458 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.