Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31042 | 93349;93350;93351 | chr2:178548502;178548501;178548500 | chr2:179413229;179413228;179413227 |
N2AB | 29401 | 88426;88427;88428 | chr2:178548502;178548501;178548500 | chr2:179413229;179413228;179413227 |
N2A | 28474 | 85645;85646;85647 | chr2:178548502;178548501;178548500 | chr2:179413229;179413228;179413227 |
N2B | 21977 | 66154;66155;66156 | chr2:178548502;178548501;178548500 | chr2:179413229;179413228;179413227 |
Novex-1 | 22102 | 66529;66530;66531 | chr2:178548502;178548501;178548500 | chr2:179413229;179413228;179413227 |
Novex-2 | 22169 | 66730;66731;66732 | chr2:178548502;178548501;178548500 | chr2:179413229;179413228;179413227 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs1575474263 | None | 0.995 | N | 0.595 | 0.422 | 0.754779769779 | gnomAD-4.0.0 | 1.36835E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79888E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2342 | likely_benign | 0.2215 | benign | -0.496 | Destabilizing | 0.919 | D | 0.444 | neutral | None | None | None | None | I |
L/C | 0.4688 | ambiguous | 0.4578 | ambiguous | -0.632 | Destabilizing | 0.999 | D | 0.497 | neutral | None | None | None | None | I |
L/D | 0.5641 | likely_pathogenic | 0.5234 | ambiguous | -0.031 | Destabilizing | 0.851 | D | 0.54 | neutral | None | None | None | None | I |
L/E | 0.335 | likely_benign | 0.3249 | benign | -0.121 | Destabilizing | 0.919 | D | 0.528 | neutral | None | None | None | None | I |
L/F | 0.1455 | likely_benign | 0.1291 | benign | -0.542 | Destabilizing | 0.995 | D | 0.405 | neutral | N | 0.437014998 | None | None | I |
L/G | 0.5027 | ambiguous | 0.4658 | ambiguous | -0.646 | Destabilizing | 0.851 | D | 0.519 | neutral | None | None | None | None | I |
L/H | 0.1582 | likely_benign | 0.1463 | benign | 0.009 | Stabilizing | 0.984 | D | 0.577 | neutral | N | 0.426414003 | None | None | I |
L/I | 0.0948 | likely_benign | 0.0981 | benign | -0.225 | Destabilizing | 0.982 | D | 0.42 | neutral | N | 0.361325161 | None | None | I |
L/K | 0.3189 | likely_benign | 0.3063 | benign | -0.257 | Destabilizing | 0.919 | D | 0.524 | neutral | None | None | None | None | I |
L/M | 0.1182 | likely_benign | 0.1146 | benign | -0.383 | Destabilizing | 0.996 | D | 0.423 | neutral | None | None | None | None | I |
L/N | 0.2126 | likely_benign | 0.2004 | benign | -0.067 | Destabilizing | 0.015 | N | 0.282 | neutral | None | None | None | None | I |
L/P | 0.6352 | likely_pathogenic | 0.605 | pathogenic | -0.283 | Destabilizing | 0.995 | D | 0.595 | neutral | N | 0.450656299 | None | None | I |
L/Q | 0.1305 | likely_benign | 0.124 | benign | -0.263 | Destabilizing | 0.988 | D | 0.575 | neutral | None | None | None | None | I |
L/R | 0.2197 | likely_benign | 0.2124 | benign | 0.234 | Stabilizing | 0.968 | D | 0.5 | neutral | N | 0.431627821 | None | None | I |
L/S | 0.2283 | likely_benign | 0.206 | benign | -0.515 | Destabilizing | 0.851 | D | 0.512 | neutral | None | None | None | None | I |
L/T | 0.1922 | likely_benign | 0.1784 | benign | -0.494 | Destabilizing | 0.919 | D | 0.463 | neutral | None | None | None | None | I |
L/V | 0.1027 | likely_benign | 0.1068 | benign | -0.283 | Destabilizing | 0.946 | D | 0.456 | neutral | N | 0.404518578 | None | None | I |
L/W | 0.2319 | likely_benign | 0.2033 | benign | -0.567 | Destabilizing | 0.999 | D | 0.659 | neutral | None | None | None | None | I |
L/Y | 0.2842 | likely_benign | 0.2563 | benign | -0.31 | Destabilizing | 0.996 | D | 0.458 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.