Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31049 | 93370;93371;93372 | chr2:178548481;178548480;178548479 | chr2:179413208;179413207;179413206 |
N2AB | 29408 | 88447;88448;88449 | chr2:178548481;178548480;178548479 | chr2:179413208;179413207;179413206 |
N2A | 28481 | 85666;85667;85668 | chr2:178548481;178548480;178548479 | chr2:179413208;179413207;179413206 |
N2B | 21984 | 66175;66176;66177 | chr2:178548481;178548480;178548479 | chr2:179413208;179413207;179413206 |
Novex-1 | 22109 | 66550;66551;66552 | chr2:178548481;178548480;178548479 | chr2:179413208;179413207;179413206 |
Novex-2 | 22176 | 66751;66752;66753 | chr2:178548481;178548480;178548479 | chr2:179413208;179413207;179413206 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/N | None | None | 0.822 | N | 0.521 | 0.291 | 0.239305524855 | gnomAD-4.0.0 | 1.59112E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.77269E-05 | None | 0 | 0 | 0 | 0 | 0 |
H/Q | None | None | 0.942 | N | 0.536 | 0.249 | 0.271763555656 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
H/Y | None | None | 0.966 | N | 0.527 | 0.371 | 0.357313475932 | gnomAD-4.0.0 | 1.59112E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43271E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.2924 | likely_benign | 0.2673 | benign | 0.473 | Stabilizing | 0.86 | D | 0.523 | neutral | None | None | None | None | I |
H/C | 0.2097 | likely_benign | 0.1938 | benign | 1.155 | Stabilizing | 0.998 | D | 0.754 | deleterious | None | None | None | None | I |
H/D | 0.3262 | likely_benign | 0.2612 | benign | -0.108 | Destabilizing | 0.97 | D | 0.539 | neutral | N | 0.375350464 | None | None | I |
H/E | 0.3468 | ambiguous | 0.2918 | benign | -0.06 | Destabilizing | 0.86 | D | 0.461 | neutral | None | None | None | None | I |
H/F | 0.3076 | likely_benign | 0.3016 | benign | 1.333 | Stabilizing | 0.993 | D | 0.621 | neutral | None | None | None | None | I |
H/G | 0.3134 | likely_benign | 0.2717 | benign | 0.153 | Stabilizing | 0.86 | D | 0.525 | neutral | None | None | None | None | I |
H/I | 0.2903 | likely_benign | 0.2638 | benign | 1.312 | Stabilizing | 0.978 | D | 0.706 | prob.neutral | None | None | None | None | I |
H/K | 0.2642 | likely_benign | 0.2293 | benign | 0.505 | Stabilizing | 0.754 | D | 0.506 | neutral | None | None | None | None | I |
H/L | 0.1114 | likely_benign | 0.0991 | benign | 1.312 | Stabilizing | 0.942 | D | 0.571 | neutral | N | 0.318209102 | None | None | I |
H/M | 0.4333 | ambiguous | 0.412 | ambiguous | 1.019 | Stabilizing | 0.998 | D | 0.678 | prob.neutral | None | None | None | None | I |
H/N | 0.0972 | likely_benign | 0.0874 | benign | 0.504 | Stabilizing | 0.822 | D | 0.521 | neutral | N | 0.351110954 | None | None | I |
H/P | 0.4908 | ambiguous | 0.4058 | ambiguous | 1.058 | Stabilizing | 0.99 | D | 0.689 | prob.neutral | N | 0.437460503 | None | None | I |
H/Q | 0.159 | likely_benign | 0.1489 | benign | 0.66 | Stabilizing | 0.942 | D | 0.536 | neutral | N | 0.343048832 | None | None | I |
H/R | 0.1126 | likely_benign | 0.1063 | benign | -0.314 | Destabilizing | 0.014 | N | 0.231 | neutral | N | 0.346723855 | None | None | I |
H/S | 0.1926 | likely_benign | 0.1661 | benign | 0.746 | Stabilizing | 0.86 | D | 0.531 | neutral | None | None | None | None | I |
H/T | 0.191 | likely_benign | 0.1716 | benign | 0.892 | Stabilizing | 0.956 | D | 0.547 | neutral | None | None | None | None | I |
H/V | 0.2592 | likely_benign | 0.2378 | benign | 1.058 | Stabilizing | 0.978 | D | 0.689 | prob.neutral | None | None | None | None | I |
H/W | 0.4819 | ambiguous | 0.4715 | ambiguous | 1.326 | Stabilizing | 0.998 | D | 0.765 | deleterious | None | None | None | None | I |
H/Y | 0.1134 | likely_benign | 0.1126 | benign | 1.564 | Stabilizing | 0.966 | D | 0.527 | neutral | N | 0.426686148 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.