Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31053 | 93382;93383;93384 | chr2:178548469;178548468;178548467 | chr2:179413196;179413195;179413194 |
N2AB | 29412 | 88459;88460;88461 | chr2:178548469;178548468;178548467 | chr2:179413196;179413195;179413194 |
N2A | 28485 | 85678;85679;85680 | chr2:178548469;178548468;178548467 | chr2:179413196;179413195;179413194 |
N2B | 21988 | 66187;66188;66189 | chr2:178548469;178548468;178548467 | chr2:179413196;179413195;179413194 |
Novex-1 | 22113 | 66562;66563;66564 | chr2:178548469;178548468;178548467 | chr2:179413196;179413195;179413194 |
Novex-2 | 22180 | 66763;66764;66765 | chr2:178548469;178548468;178548467 | chr2:179413196;179413195;179413194 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.334 | D | 0.605 | 0.534 | 0.671746105685 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
V/L | None | None | 0.002 | N | 0.333 | 0.142 | 0.348764635752 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6304 | likely_pathogenic | 0.585 | pathogenic | -2.284 | Highly Destabilizing | 0.334 | N | 0.605 | neutral | D | 0.548389794 | None | None | N |
V/C | 0.9403 | likely_pathogenic | 0.9339 | pathogenic | -1.829 | Destabilizing | 0.982 | D | 0.762 | deleterious | None | None | None | None | N |
V/D | 0.9964 | likely_pathogenic | 0.9951 | pathogenic | -3.275 | Highly Destabilizing | 0.826 | D | 0.903 | deleterious | None | None | None | None | N |
V/E | 0.988 | likely_pathogenic | 0.984 | pathogenic | -2.953 | Highly Destabilizing | 0.781 | D | 0.877 | deleterious | D | 0.567254517 | None | None | N |
V/F | 0.6706 | likely_pathogenic | 0.6791 | pathogenic | -1.311 | Destabilizing | 0.7 | D | 0.769 | deleterious | None | None | None | None | N |
V/G | 0.8926 | likely_pathogenic | 0.8679 | pathogenic | -2.91 | Highly Destabilizing | 0.781 | D | 0.896 | deleterious | D | 0.567254517 | None | None | N |
V/H | 0.9956 | likely_pathogenic | 0.9943 | pathogenic | -2.867 | Highly Destabilizing | 0.982 | D | 0.873 | deleterious | None | None | None | None | N |
V/I | 0.0708 | likely_benign | 0.0727 | benign | -0.47 | Destabilizing | 0.002 | N | 0.273 | neutral | N | 0.463151168 | None | None | N |
V/K | 0.9912 | likely_pathogenic | 0.9887 | pathogenic | -1.899 | Destabilizing | 0.826 | D | 0.877 | deleterious | None | None | None | None | N |
V/L | 0.2608 | likely_benign | 0.2287 | benign | -0.47 | Destabilizing | 0.002 | N | 0.333 | neutral | N | 0.521183538 | None | None | N |
V/M | 0.3577 | ambiguous | 0.3544 | ambiguous | -0.749 | Destabilizing | 0.7 | D | 0.663 | neutral | None | None | None | None | N |
V/N | 0.987 | likely_pathogenic | 0.9841 | pathogenic | -2.578 | Highly Destabilizing | 0.935 | D | 0.913 | deleterious | None | None | None | None | N |
V/P | 0.9821 | likely_pathogenic | 0.9715 | pathogenic | -1.054 | Destabilizing | 0.935 | D | 0.89 | deleterious | None | None | None | None | N |
V/Q | 0.9851 | likely_pathogenic | 0.9805 | pathogenic | -2.214 | Highly Destabilizing | 0.935 | D | 0.902 | deleterious | None | None | None | None | N |
V/R | 0.9833 | likely_pathogenic | 0.9784 | pathogenic | -2.006 | Highly Destabilizing | 0.826 | D | 0.913 | deleterious | None | None | None | None | N |
V/S | 0.9337 | likely_pathogenic | 0.9206 | pathogenic | -3.116 | Highly Destabilizing | 0.826 | D | 0.859 | deleterious | None | None | None | None | N |
V/T | 0.7109 | likely_pathogenic | 0.6816 | pathogenic | -2.627 | Highly Destabilizing | 0.399 | N | 0.631 | neutral | None | None | None | None | N |
V/W | 0.9908 | likely_pathogenic | 0.9899 | pathogenic | -1.922 | Destabilizing | 0.982 | D | 0.846 | deleterious | None | None | None | None | N |
V/Y | 0.9749 | likely_pathogenic | 0.9714 | pathogenic | -1.552 | Destabilizing | 0.826 | D | 0.771 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.