Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31091 | 93496;93497;93498 | chr2:178548355;178548354;178548353 | chr2:179413082;179413081;179413080 |
N2AB | 29450 | 88573;88574;88575 | chr2:178548355;178548354;178548353 | chr2:179413082;179413081;179413080 |
N2A | 28523 | 85792;85793;85794 | chr2:178548355;178548354;178548353 | chr2:179413082;179413081;179413080 |
N2B | 22026 | 66301;66302;66303 | chr2:178548355;178548354;178548353 | chr2:179413082;179413081;179413080 |
Novex-1 | 22151 | 66676;66677;66678 | chr2:178548355;178548354;178548353 | chr2:179413082;179413081;179413080 |
Novex-2 | 22218 | 66877;66878;66879 | chr2:178548355;178548354;178548353 | chr2:179413082;179413081;179413080 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | None | None | 0.001 | N | 0.671 | 0.275 | 0.400613892164 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0756 | likely_benign | 0.083 | benign | -1.113 | Destabilizing | 0.037 | N | 0.453 | neutral | N | 0.476842823 | None | None | N |
S/C | 0.0814 | likely_benign | 0.0757 | benign | -1.031 | Destabilizing | 0.822 | D | 0.694 | prob.neutral | N | 0.501087907 | None | None | N |
S/D | 0.7218 | likely_pathogenic | 0.7346 | pathogenic | -2.063 | Highly Destabilizing | 0.364 | N | 0.647 | neutral | None | None | None | None | N |
S/E | 0.6875 | likely_pathogenic | 0.6989 | pathogenic | -1.848 | Destabilizing | 0.364 | N | 0.654 | neutral | None | None | None | None | N |
S/F | 0.2199 | likely_benign | 0.2215 | benign | -0.662 | Destabilizing | 0.001 | N | 0.671 | neutral | N | 0.483232865 | None | None | N |
S/G | 0.1215 | likely_benign | 0.1214 | benign | -1.497 | Destabilizing | 0.191 | N | 0.572 | neutral | None | None | None | None | N |
S/H | 0.4174 | ambiguous | 0.3993 | ambiguous | -1.701 | Destabilizing | 0.859 | D | 0.695 | prob.neutral | None | None | None | None | N |
S/I | 0.2296 | likely_benign | 0.2411 | benign | -0.122 | Destabilizing | 0.004 | N | 0.535 | neutral | None | None | None | None | N |
S/K | 0.7276 | likely_pathogenic | 0.7328 | pathogenic | -0.792 | Destabilizing | 0.22 | N | 0.654 | neutral | None | None | None | None | N |
S/L | 0.0848 | likely_benign | 0.0907 | benign | -0.122 | Destabilizing | 0.025 | N | 0.693 | prob.neutral | None | None | None | None | N |
S/M | 0.1574 | likely_benign | 0.1638 | benign | -0.386 | Destabilizing | 0.025 | N | 0.641 | neutral | None | None | None | None | N |
S/N | 0.2666 | likely_benign | 0.2747 | benign | -1.514 | Destabilizing | 0.364 | N | 0.642 | neutral | None | None | None | None | N |
S/P | 0.9706 | likely_pathogenic | 0.9657 | pathogenic | -0.421 | Destabilizing | 0.822 | D | 0.72 | prob.delet. | N | 0.503551597 | None | None | N |
S/Q | 0.5401 | ambiguous | 0.5553 | ambiguous | -1.18 | Destabilizing | 0.667 | D | 0.684 | prob.neutral | None | None | None | None | N |
S/R | 0.6105 | likely_pathogenic | 0.6225 | pathogenic | -1.135 | Destabilizing | 0.667 | D | 0.725 | prob.delet. | None | None | None | None | N |
S/T | 0.0859 | likely_benign | 0.0913 | benign | -1.129 | Destabilizing | 0.001 | N | 0.249 | neutral | N | 0.446021271 | None | None | N |
S/V | 0.2088 | likely_benign | 0.22 | benign | -0.421 | Destabilizing | 0.002 | N | 0.5 | neutral | None | None | None | None | N |
S/W | 0.3479 | ambiguous | 0.3242 | benign | -1.019 | Destabilizing | 0.883 | D | 0.729 | prob.delet. | None | None | None | None | N |
S/Y | 0.2104 | likely_benign | 0.1931 | benign | -0.601 | Destabilizing | 0.272 | N | 0.719 | prob.delet. | N | 0.484790303 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.