Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31095 | 93508;93509;93510 | chr2:178548343;178548342;178548341 | chr2:179413070;179413069;179413068 |
N2AB | 29454 | 88585;88586;88587 | chr2:178548343;178548342;178548341 | chr2:179413070;179413069;179413068 |
N2A | 28527 | 85804;85805;85806 | chr2:178548343;178548342;178548341 | chr2:179413070;179413069;179413068 |
N2B | 22030 | 66313;66314;66315 | chr2:178548343;178548342;178548341 | chr2:179413070;179413069;179413068 |
Novex-1 | 22155 | 66688;66689;66690 | chr2:178548343;178548342;178548341 | chr2:179413070;179413069;179413068 |
Novex-2 | 22222 | 66889;66890;66891 | chr2:178548343;178548342;178548341 | chr2:179413070;179413069;179413068 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs1235567368 | None | 0.989 | N | 0.543 | 0.537 | 0.405560941015 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/G | rs1235567368 | None | 0.989 | N | 0.543 | 0.537 | 0.405560941015 | gnomAD-4.0.0 | 2.56201E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.7856E-06 | 0 | 0 |
E/K | None | None | 0.956 | N | 0.517 | 0.248 | 0.275215494804 | gnomAD-4.0.0 | 3.18228E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.77254E-05 | None | 0 | 0 | 0 | 0 | 3.02371E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3013 | likely_benign | 0.2695 | benign | -0.619 | Destabilizing | 0.978 | D | 0.543 | neutral | N | 0.516401289 | None | None | I |
E/C | 0.9523 | likely_pathogenic | 0.9373 | pathogenic | -0.282 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | I |
E/D | 0.2799 | likely_benign | 0.2265 | benign | -0.395 | Destabilizing | 0.948 | D | 0.454 | neutral | N | 0.509822033 | None | None | I |
E/F | 0.9477 | likely_pathogenic | 0.9238 | pathogenic | -0.322 | Destabilizing | 0.999 | D | 0.643 | neutral | None | None | None | None | I |
E/G | 0.4848 | ambiguous | 0.4221 | ambiguous | -0.848 | Destabilizing | 0.989 | D | 0.543 | neutral | N | 0.488958698 | None | None | I |
E/H | 0.79 | likely_pathogenic | 0.7451 | pathogenic | -0.063 | Destabilizing | 0.998 | D | 0.433 | neutral | None | None | None | None | I |
E/I | 0.5525 | ambiguous | 0.4708 | ambiguous | -0.034 | Destabilizing | 0.999 | D | 0.641 | neutral | None | None | None | None | I |
E/K | 0.3514 | ambiguous | 0.3077 | benign | -0.037 | Destabilizing | 0.956 | D | 0.517 | neutral | N | 0.477325613 | None | None | I |
E/L | 0.7327 | likely_pathogenic | 0.6454 | pathogenic | -0.034 | Destabilizing | 0.995 | D | 0.558 | neutral | None | None | None | None | I |
E/M | 0.7117 | likely_pathogenic | 0.6413 | pathogenic | 0.082 | Stabilizing | 1.0 | D | 0.614 | neutral | None | None | None | None | I |
E/N | 0.5489 | ambiguous | 0.4794 | ambiguous | -0.345 | Destabilizing | 0.998 | D | 0.455 | neutral | None | None | None | None | I |
E/P | 0.7848 | likely_pathogenic | 0.6804 | pathogenic | -0.209 | Destabilizing | 0.999 | D | 0.521 | neutral | None | None | None | None | I |
E/Q | 0.2452 | likely_benign | 0.2176 | benign | -0.283 | Destabilizing | 0.63 | D | 0.241 | neutral | N | 0.47382432 | None | None | I |
E/R | 0.526 | ambiguous | 0.4659 | ambiguous | 0.307 | Stabilizing | 0.983 | D | 0.471 | neutral | None | None | None | None | I |
E/S | 0.4266 | ambiguous | 0.3703 | ambiguous | -0.564 | Destabilizing | 0.983 | D | 0.493 | neutral | None | None | None | None | I |
E/T | 0.4526 | ambiguous | 0.3875 | ambiguous | -0.376 | Destabilizing | 0.992 | D | 0.519 | neutral | None | None | None | None | I |
E/V | 0.4103 | ambiguous | 0.3461 | ambiguous | -0.209 | Destabilizing | 0.997 | D | 0.521 | neutral | N | 0.479433407 | None | None | I |
E/W | 0.9884 | likely_pathogenic | 0.9821 | pathogenic | -0.1 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | I |
E/Y | 0.8927 | likely_pathogenic | 0.8594 | pathogenic | -0.075 | Destabilizing | 0.999 | D | 0.625 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.