Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3111 | 9556;9557;9558 | chr2:178767899;178767898;178767897 | chr2:179632626;179632625;179632624 |
N2AB | 3111 | 9556;9557;9558 | chr2:178767899;178767898;178767897 | chr2:179632626;179632625;179632624 |
N2A | 3111 | 9556;9557;9558 | chr2:178767899;178767898;178767897 | chr2:179632626;179632625;179632624 |
N2B | 3065 | 9418;9419;9420 | chr2:178767899;178767898;178767897 | chr2:179632626;179632625;179632624 |
Novex-1 | 3065 | 9418;9419;9420 | chr2:178767899;178767898;178767897 | chr2:179632626;179632625;179632624 |
Novex-2 | 3065 | 9418;9419;9420 | chr2:178767899;178767898;178767897 | chr2:179632626;179632625;179632624 |
Novex-3 | 3111 | 9556;9557;9558 | chr2:178767899;178767898;178767897 | chr2:179632626;179632625;179632624 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs2090778418 | None | 0.987 | N | 0.523 | 0.202 | 0.639788913552 | gnomAD-4.0.0 | 3.18123E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.55124E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4882 | ambiguous | 0.5276 | ambiguous | -1.972 | Destabilizing | 0.543 | D | 0.307 | neutral | D | 0.529276012 | None | None | N |
V/C | 0.8681 | likely_pathogenic | 0.8877 | pathogenic | -1.215 | Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
V/D | 0.8918 | likely_pathogenic | 0.8944 | pathogenic | -2.66 | Highly Destabilizing | 0.999 | D | 0.819 | deleterious | D | 0.551109715 | None | None | N |
V/E | 0.7427 | likely_pathogenic | 0.7307 | pathogenic | -2.608 | Highly Destabilizing | 0.999 | D | 0.79 | deleterious | None | None | None | None | N |
V/F | 0.3984 | ambiguous | 0.4137 | ambiguous | -1.357 | Destabilizing | 0.999 | D | 0.841 | deleterious | N | 0.506294339 | None | None | N |
V/G | 0.5919 | likely_pathogenic | 0.6543 | pathogenic | -2.326 | Highly Destabilizing | 0.997 | D | 0.734 | prob.delet. | N | 0.503538588 | None | None | N |
V/H | 0.8407 | likely_pathogenic | 0.8288 | pathogenic | -2.006 | Highly Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
V/I | 0.0793 | likely_benign | 0.0799 | benign | -1.039 | Destabilizing | 0.987 | D | 0.523 | neutral | N | 0.507105914 | None | None | N |
V/K | 0.6901 | likely_pathogenic | 0.6617 | pathogenic | -1.731 | Destabilizing | 0.999 | D | 0.791 | deleterious | None | None | None | None | N |
V/L | 0.3171 | likely_benign | 0.335 | benign | -1.039 | Destabilizing | 0.973 | D | 0.484 | neutral | N | 0.499302261 | None | None | N |
V/M | 0.2463 | likely_benign | 0.2754 | benign | -0.732 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | N |
V/N | 0.6333 | likely_pathogenic | 0.6678 | pathogenic | -1.628 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
V/P | 0.9917 | likely_pathogenic | 0.9899 | pathogenic | -1.324 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
V/Q | 0.596 | likely_pathogenic | 0.5899 | pathogenic | -1.744 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
V/R | 0.624 | likely_pathogenic | 0.5941 | pathogenic | -1.215 | Destabilizing | 0.999 | D | 0.825 | deleterious | None | None | None | None | N |
V/S | 0.5173 | ambiguous | 0.5735 | pathogenic | -2.032 | Highly Destabilizing | 0.995 | D | 0.733 | prob.delet. | None | None | None | None | N |
V/T | 0.3658 | ambiguous | 0.3934 | ambiguous | -1.896 | Destabilizing | 0.992 | D | 0.518 | neutral | None | None | None | None | N |
V/W | 0.9558 | likely_pathogenic | 0.9536 | pathogenic | -1.739 | Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | N |
V/Y | 0.8274 | likely_pathogenic | 0.8365 | pathogenic | -1.503 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.