Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31146 | 93661;93662;93663 | chr2:178548190;178548189;178548188 | chr2:179412917;179412916;179412915 |
N2AB | 29505 | 88738;88739;88740 | chr2:178548190;178548189;178548188 | chr2:179412917;179412916;179412915 |
N2A | 28578 | 85957;85958;85959 | chr2:178548190;178548189;178548188 | chr2:179412917;179412916;179412915 |
N2B | 22081 | 66466;66467;66468 | chr2:178548190;178548189;178548188 | chr2:179412917;179412916;179412915 |
Novex-1 | 22206 | 66841;66842;66843 | chr2:178548190;178548189;178548188 | chr2:179412917;179412916;179412915 |
Novex-2 | 22273 | 67042;67043;67044 | chr2:178548190;178548189;178548188 | chr2:179412917;179412916;179412915 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.896 | N | 0.391 | 0.269 | 0.390220360785 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
T/S | None | None | 0.016 | D | 0.142 | 0.113 | 0.19670166235 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0982 | likely_benign | 0.105 | benign | -0.658 | Destabilizing | 0.201 | N | 0.453 | neutral | N | 0.489805889 | None | None | I |
T/C | 0.3533 | ambiguous | 0.409 | ambiguous | -0.42 | Destabilizing | 0.992 | D | 0.431 | neutral | None | None | None | None | I |
T/D | 0.5024 | ambiguous | 0.4416 | ambiguous | 0.125 | Stabilizing | 0.617 | D | 0.379 | neutral | None | None | None | None | I |
T/E | 0.4006 | ambiguous | 0.3622 | ambiguous | 0.075 | Stabilizing | 0.617 | D | 0.387 | neutral | None | None | None | None | I |
T/F | 0.3005 | likely_benign | 0.303 | benign | -0.911 | Destabilizing | 0.92 | D | 0.493 | neutral | None | None | None | None | I |
T/G | 0.2451 | likely_benign | 0.2464 | benign | -0.844 | Destabilizing | 0.447 | N | 0.463 | neutral | None | None | None | None | I |
T/H | 0.3024 | likely_benign | 0.285 | benign | -1.083 | Destabilizing | 0.92 | D | 0.483 | neutral | None | None | None | None | I |
T/I | 0.153 | likely_benign | 0.1852 | benign | -0.272 | Destabilizing | 0.896 | D | 0.391 | neutral | N | 0.51375056 | None | None | I |
T/K | 0.2393 | likely_benign | 0.2309 | benign | -0.582 | Destabilizing | 0.447 | N | 0.435 | neutral | None | None | None | None | I |
T/L | 0.0969 | likely_benign | 0.1154 | benign | -0.272 | Destabilizing | 0.617 | D | 0.408 | neutral | None | None | None | None | I |
T/M | 0.0965 | likely_benign | 0.1144 | benign | -0.004 | Destabilizing | 0.992 | D | 0.434 | neutral | None | None | None | None | I |
T/N | 0.147 | likely_benign | 0.1541 | benign | -0.367 | Destabilizing | 0.379 | N | 0.406 | neutral | N | 0.488831611 | None | None | I |
T/P | 0.4028 | ambiguous | 0.3324 | benign | -0.37 | Destabilizing | 0.896 | D | 0.384 | neutral | D | 0.529599251 | None | None | I |
T/Q | 0.2612 | likely_benign | 0.2538 | benign | -0.612 | Destabilizing | 0.85 | D | 0.382 | neutral | None | None | None | None | I |
T/R | 0.2084 | likely_benign | 0.1804 | benign | -0.276 | Destabilizing | 0.005 | N | 0.161 | neutral | None | None | None | None | I |
T/S | 0.107 | likely_benign | 0.1094 | benign | -0.669 | Destabilizing | 0.016 | N | 0.142 | neutral | D | 0.524562199 | None | None | I |
T/V | 0.1265 | likely_benign | 0.1541 | benign | -0.37 | Destabilizing | 0.617 | D | 0.391 | neutral | None | None | None | None | I |
T/W | 0.6447 | likely_pathogenic | 0.5909 | pathogenic | -0.82 | Destabilizing | 0.992 | D | 0.591 | neutral | None | None | None | None | I |
T/Y | 0.3681 | ambiguous | 0.35 | ambiguous | -0.595 | Destabilizing | 0.972 | D | 0.495 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.