Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3115 | 9568;9569;9570 | chr2:178767887;178767886;178767885 | chr2:179632614;179632613;179632612 |
N2AB | 3115 | 9568;9569;9570 | chr2:178767887;178767886;178767885 | chr2:179632614;179632613;179632612 |
N2A | 3115 | 9568;9569;9570 | chr2:178767887;178767886;178767885 | chr2:179632614;179632613;179632612 |
N2B | 3069 | 9430;9431;9432 | chr2:178767887;178767886;178767885 | chr2:179632614;179632613;179632612 |
Novex-1 | 3069 | 9430;9431;9432 | chr2:178767887;178767886;178767885 | chr2:179632614;179632613;179632612 |
Novex-2 | 3069 | 9430;9431;9432 | chr2:178767887;178767886;178767885 | chr2:179632614;179632613;179632612 |
Novex-3 | 3115 | 9568;9569;9570 | chr2:178767887;178767886;178767885 | chr2:179632614;179632613;179632612 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/R | rs773714030 | -1.688 | 0.484 | N | 0.576 | 0.461 | 0.731167935182 | gnomAD-2.1.1 | 3.98E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.81E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.4218 | ambiguous | 0.6084 | pathogenic | -2.464 | Highly Destabilizing | 0.035 | N | 0.525 | neutral | None | None | None | None | N |
L/C | 0.5861 | likely_pathogenic | 0.7334 | pathogenic | -1.585 | Destabilizing | 0.935 | D | 0.598 | neutral | None | None | None | None | N |
L/D | 0.9188 | likely_pathogenic | 0.9596 | pathogenic | -2.604 | Highly Destabilizing | 0.791 | D | 0.604 | neutral | None | None | None | None | N |
L/E | 0.693 | likely_pathogenic | 0.8153 | pathogenic | -2.468 | Highly Destabilizing | 0.555 | D | 0.621 | neutral | None | None | None | None | N |
L/F | 0.1578 | likely_benign | 0.2307 | benign | -1.482 | Destabilizing | 0.001 | N | 0.449 | neutral | None | None | None | None | N |
L/G | 0.8167 | likely_pathogenic | 0.9108 | pathogenic | -2.922 | Highly Destabilizing | 0.262 | N | 0.608 | neutral | None | None | None | None | N |
L/H | 0.2892 | likely_benign | 0.4609 | ambiguous | -2.279 | Highly Destabilizing | 0.824 | D | 0.618 | neutral | None | None | None | None | N |
L/I | 0.0885 | likely_benign | 0.1224 | benign | -1.179 | Destabilizing | 0.001 | N | 0.288 | neutral | None | None | None | None | N |
L/K | 0.6644 | likely_pathogenic | 0.7747 | pathogenic | -2.052 | Highly Destabilizing | 0.262 | N | 0.6 | neutral | None | None | None | None | N |
L/M | 0.1063 | likely_benign | 0.1496 | benign | -0.952 | Destabilizing | 0.005 | N | 0.318 | neutral | N | 0.452318985 | None | None | N |
L/N | 0.5288 | ambiguous | 0.7137 | pathogenic | -2.101 | Highly Destabilizing | 0.791 | D | 0.599 | neutral | None | None | None | None | N |
L/P | 0.9842 | likely_pathogenic | 0.9877 | pathogenic | -1.586 | Destabilizing | 0.741 | D | 0.6 | neutral | D | 0.551233173 | None | None | N |
L/Q | 0.2611 | likely_benign | 0.4093 | ambiguous | -2.114 | Highly Destabilizing | 0.484 | N | 0.571 | neutral | N | 0.470655251 | None | None | N |
L/R | 0.5312 | ambiguous | 0.64 | pathogenic | -1.527 | Destabilizing | 0.484 | N | 0.576 | neutral | N | 0.465285128 | None | None | N |
L/S | 0.4167 | ambiguous | 0.6516 | pathogenic | -2.732 | Highly Destabilizing | 0.262 | N | 0.566 | neutral | None | None | None | None | N |
L/T | 0.3221 | likely_benign | 0.5216 | ambiguous | -2.48 | Highly Destabilizing | 0.149 | N | 0.589 | neutral | None | None | None | None | N |
L/V | 0.1081 | likely_benign | 0.1511 | benign | -1.586 | Destabilizing | None | N | 0.278 | neutral | N | 0.392400723 | None | None | N |
L/W | 0.3295 | likely_benign | 0.4556 | ambiguous | -1.807 | Destabilizing | 0.824 | D | 0.588 | neutral | None | None | None | None | N |
L/Y | 0.3934 | ambiguous | 0.5447 | ambiguous | -1.581 | Destabilizing | 0.235 | N | 0.625 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.