Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31150 | 93673;93674;93675 | chr2:178548178;178548177;178548176 | chr2:179412905;179412904;179412903 |
N2AB | 29509 | 88750;88751;88752 | chr2:178548178;178548177;178548176 | chr2:179412905;179412904;179412903 |
N2A | 28582 | 85969;85970;85971 | chr2:178548178;178548177;178548176 | chr2:179412905;179412904;179412903 |
N2B | 22085 | 66478;66479;66480 | chr2:178548178;178548177;178548176 | chr2:179412905;179412904;179412903 |
Novex-1 | 22210 | 66853;66854;66855 | chr2:178548178;178548177;178548176 | chr2:179412905;179412904;179412903 |
Novex-2 | 22277 | 67054;67055;67056 | chr2:178548178;178548177;178548176 | chr2:179412905;179412904;179412903 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 0.99 | N | 0.873 | 0.585 | 0.790458859785 | gnomAD-4.0.0 | 1.59107E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43275E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.7003 | likely_pathogenic | 0.6889 | pathogenic | -3.115 | Highly Destabilizing | 0.717 | D | 0.653 | neutral | None | None | None | None | N |
L/C | 0.7687 | likely_pathogenic | 0.7537 | pathogenic | -2.071 | Highly Destabilizing | 0.998 | D | 0.782 | deleterious | None | None | None | None | N |
L/D | 0.9973 | likely_pathogenic | 0.9969 | pathogenic | -3.68 | Highly Destabilizing | 0.993 | D | 0.874 | deleterious | None | None | None | None | N |
L/E | 0.9827 | likely_pathogenic | 0.9787 | pathogenic | -3.358 | Highly Destabilizing | 0.993 | D | 0.867 | deleterious | None | None | None | None | N |
L/F | 0.6432 | likely_pathogenic | 0.638 | pathogenic | -1.861 | Destabilizing | 0.942 | D | 0.664 | neutral | N | 0.478199775 | None | None | N |
L/G | 0.959 | likely_pathogenic | 0.9542 | pathogenic | -3.697 | Highly Destabilizing | 0.978 | D | 0.853 | deleterious | None | None | None | None | N |
L/H | 0.9712 | likely_pathogenic | 0.9659 | pathogenic | -3.256 | Highly Destabilizing | 0.997 | D | 0.875 | deleterious | N | 0.489974154 | None | None | N |
L/I | 0.0792 | likely_benign | 0.0828 | benign | -1.334 | Destabilizing | 0.014 | N | 0.31 | neutral | N | 0.367306984 | None | None | N |
L/K | 0.9827 | likely_pathogenic | 0.9781 | pathogenic | -2.421 | Highly Destabilizing | 0.978 | D | 0.815 | deleterious | None | None | None | None | N |
L/M | 0.2596 | likely_benign | 0.2627 | benign | -1.473 | Destabilizing | 0.956 | D | 0.617 | neutral | None | None | None | None | N |
L/N | 0.9833 | likely_pathogenic | 0.9823 | pathogenic | -3.168 | Highly Destabilizing | 0.993 | D | 0.881 | deleterious | None | None | None | None | N |
L/P | 0.9516 | likely_pathogenic | 0.9432 | pathogenic | -1.924 | Destabilizing | 0.99 | D | 0.873 | deleterious | N | 0.478453265 | None | None | N |
L/Q | 0.9535 | likely_pathogenic | 0.945 | pathogenic | -2.804 | Highly Destabilizing | 0.993 | D | 0.868 | deleterious | None | None | None | None | N |
L/R | 0.9637 | likely_pathogenic | 0.9532 | pathogenic | -2.454 | Highly Destabilizing | 0.99 | D | 0.857 | deleterious | N | 0.489974154 | None | None | N |
L/S | 0.9467 | likely_pathogenic | 0.9468 | pathogenic | -3.654 | Highly Destabilizing | 0.978 | D | 0.783 | deleterious | None | None | None | None | N |
L/T | 0.6995 | likely_pathogenic | 0.7134 | pathogenic | -3.177 | Highly Destabilizing | 0.86 | D | 0.651 | neutral | None | None | None | None | N |
L/V | 0.071 | likely_benign | 0.0732 | benign | -1.924 | Destabilizing | 0.025 | N | 0.322 | neutral | N | 0.345387343 | None | None | N |
L/W | 0.9405 | likely_pathogenic | 0.9239 | pathogenic | -2.154 | Highly Destabilizing | 0.998 | D | 0.832 | deleterious | None | None | None | None | N |
L/Y | 0.9597 | likely_pathogenic | 0.9542 | pathogenic | -2.081 | Highly Destabilizing | 0.978 | D | 0.757 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.