Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3117 | 9574;9575;9576 | chr2:178767881;178767880;178767879 | chr2:179632608;179632607;179632606 |
N2AB | 3117 | 9574;9575;9576 | chr2:178767881;178767880;178767879 | chr2:179632608;179632607;179632606 |
N2A | 3117 | 9574;9575;9576 | chr2:178767881;178767880;178767879 | chr2:179632608;179632607;179632606 |
N2B | 3071 | 9436;9437;9438 | chr2:178767881;178767880;178767879 | chr2:179632608;179632607;179632606 |
Novex-1 | 3071 | 9436;9437;9438 | chr2:178767881;178767880;178767879 | chr2:179632608;179632607;179632606 |
Novex-2 | 3071 | 9436;9437;9438 | chr2:178767881;178767880;178767879 | chr2:179632608;179632607;179632606 |
Novex-3 | 3117 | 9574;9575;9576 | chr2:178767881;178767880;178767879 | chr2:179632608;179632607;179632606 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs752062913 | None | 0.379 | N | 0.473 | 0.298 | 0.577897453458 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/L | rs752062913 | None | 0.379 | N | 0.473 | 0.298 | 0.577897453458 | gnomAD-4.0.0 | 1.85874E-06 | None | None | None | None | N | None | 1.33472E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.69489E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1528 | likely_benign | 0.2045 | benign | -1.446 | Destabilizing | 0.004 | N | 0.149 | neutral | N | 0.494848809 | None | None | N |
P/C | 0.8291 | likely_pathogenic | 0.8681 | pathogenic | -1.147 | Destabilizing | 0.992 | D | 0.542 | neutral | None | None | None | None | N |
P/D | 0.7832 | likely_pathogenic | 0.855 | pathogenic | -1.052 | Destabilizing | 0.617 | D | 0.388 | neutral | None | None | None | None | N |
P/E | 0.6309 | likely_pathogenic | 0.7118 | pathogenic | -1.051 | Destabilizing | 0.447 | N | 0.388 | neutral | None | None | None | None | N |
P/F | 0.7365 | likely_pathogenic | 0.8091 | pathogenic | -1.093 | Destabilizing | 0.92 | D | 0.568 | neutral | None | None | None | None | N |
P/G | 0.5114 | ambiguous | 0.5985 | pathogenic | -1.767 | Destabilizing | 0.447 | N | 0.416 | neutral | None | None | None | None | N |
P/H | 0.4114 | ambiguous | 0.4956 | ambiguous | -1.228 | Destabilizing | 0.977 | D | 0.5 | neutral | None | None | None | None | N |
P/I | 0.5643 | likely_pathogenic | 0.6687 | pathogenic | -0.672 | Destabilizing | 0.739 | D | 0.538 | neutral | None | None | None | None | N |
P/K | 0.7252 | likely_pathogenic | 0.7984 | pathogenic | -1.175 | Destabilizing | 0.447 | N | 0.381 | neutral | None | None | None | None | N |
P/L | 0.2376 | likely_benign | 0.3023 | benign | -0.672 | Destabilizing | 0.379 | N | 0.473 | neutral | N | 0.470106427 | None | None | N |
P/M | 0.554 | ambiguous | 0.6535 | pathogenic | -0.61 | Destabilizing | 0.92 | D | 0.504 | neutral | None | None | None | None | N |
P/N | 0.5255 | ambiguous | 0.6257 | pathogenic | -0.976 | Destabilizing | 0.85 | D | 0.471 | neutral | None | None | None | None | N |
P/Q | 0.3366 | likely_benign | 0.4199 | ambiguous | -1.14 | Destabilizing | 0.045 | N | 0.161 | neutral | N | 0.440821912 | None | None | N |
P/R | 0.5465 | ambiguous | 0.5995 | pathogenic | -0.673 | Destabilizing | 0.81 | D | 0.462 | neutral | N | 0.473549801 | None | None | N |
P/S | 0.2003 | likely_benign | 0.2672 | benign | -1.561 | Destabilizing | 0.201 | N | 0.389 | neutral | N | 0.424711226 | None | None | N |
P/T | 0.1804 | likely_benign | 0.2388 | benign | -1.444 | Destabilizing | 0.004 | N | 0.195 | neutral | N | 0.482672908 | None | None | N |
P/V | 0.4104 | ambiguous | 0.514 | ambiguous | -0.895 | Destabilizing | 0.447 | N | 0.427 | neutral | None | None | None | None | N |
P/W | 0.8804 | likely_pathogenic | 0.9045 | pathogenic | -1.234 | Destabilizing | 0.992 | D | 0.597 | neutral | None | None | None | None | N |
P/Y | 0.7097 | likely_pathogenic | 0.7793 | pathogenic | -0.95 | Destabilizing | 0.92 | D | 0.583 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.