Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31174 | 93745;93746;93747 | chr2:178548106;178548105;178548104 | chr2:179412833;179412832;179412831 |
N2AB | 29533 | 88822;88823;88824 | chr2:178548106;178548105;178548104 | chr2:179412833;179412832;179412831 |
N2A | 28606 | 86041;86042;86043 | chr2:178548106;178548105;178548104 | chr2:179412833;179412832;179412831 |
N2B | 22109 | 66550;66551;66552 | chr2:178548106;178548105;178548104 | chr2:179412833;179412832;179412831 |
Novex-1 | 22234 | 66925;66926;66927 | chr2:178548106;178548105;178548104 | chr2:179412833;179412832;179412831 |
Novex-2 | 22301 | 67126;67127;67128 | chr2:178548106;178548105;178548104 | chr2:179412833;179412832;179412831 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.477 | N | 0.58 | 0.327 | 0.300784259202 | gnomAD-4.0.0 | 4.80129E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.25001E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1613 | likely_benign | 0.1593 | benign | -0.622 | Destabilizing | 0.645 | D | 0.596 | neutral | N | 0.473229302 | None | None | N |
E/C | 0.7819 | likely_pathogenic | 0.8075 | pathogenic | -0.179 | Destabilizing | 0.995 | D | 0.69 | prob.neutral | None | None | None | None | N |
E/D | 0.0896 | likely_benign | 0.097 | benign | -0.442 | Destabilizing | 0.006 | N | 0.245 | neutral | N | 0.418914814 | None | None | N |
E/F | 0.7558 | likely_pathogenic | 0.7743 | pathogenic | -0.297 | Destabilizing | 0.995 | D | 0.698 | prob.neutral | None | None | None | None | N |
E/G | 0.1225 | likely_benign | 0.1169 | benign | -0.851 | Destabilizing | 0.477 | N | 0.58 | neutral | N | 0.463609741 | None | None | N |
E/H | 0.3851 | ambiguous | 0.3846 | ambiguous | -0.109 | Destabilizing | 0.945 | D | 0.615 | neutral | None | None | None | None | N |
E/I | 0.4728 | ambiguous | 0.4955 | ambiguous | -0.037 | Destabilizing | 0.945 | D | 0.717 | prob.delet. | None | None | None | None | N |
E/K | 0.1537 | likely_benign | 0.1436 | benign | 0.267 | Stabilizing | 0.645 | D | 0.551 | neutral | N | 0.394075085 | None | None | N |
E/L | 0.4124 | ambiguous | 0.4244 | ambiguous | -0.037 | Destabilizing | 0.945 | D | 0.699 | prob.neutral | None | None | None | None | N |
E/M | 0.5064 | ambiguous | 0.5217 | ambiguous | 0.13 | Stabilizing | 0.995 | D | 0.68 | prob.neutral | None | None | None | None | N |
E/N | 0.1811 | likely_benign | 0.1915 | benign | -0.253 | Destabilizing | 0.017 | N | 0.316 | neutral | None | None | None | None | N |
E/P | 0.3489 | ambiguous | 0.3489 | ambiguous | -0.212 | Destabilizing | 0.945 | D | 0.69 | prob.neutral | None | None | None | None | N |
E/Q | 0.1357 | likely_benign | 0.132 | benign | -0.19 | Destabilizing | 0.864 | D | 0.589 | neutral | N | 0.455296902 | None | None | N |
E/R | 0.2645 | likely_benign | 0.2449 | benign | 0.497 | Stabilizing | 0.894 | D | 0.601 | neutral | None | None | None | None | N |
E/S | 0.1479 | likely_benign | 0.1519 | benign | -0.398 | Destabilizing | 0.547 | D | 0.537 | neutral | None | None | None | None | N |
E/T | 0.1793 | likely_benign | 0.1872 | benign | -0.197 | Destabilizing | 0.707 | D | 0.621 | neutral | None | None | None | None | N |
E/V | 0.2885 | likely_benign | 0.2994 | benign | -0.212 | Destabilizing | 0.928 | D | 0.683 | prob.neutral | N | 0.459492 | None | None | N |
E/W | 0.8636 | likely_pathogenic | 0.8561 | pathogenic | -0.041 | Destabilizing | 0.995 | D | 0.681 | prob.neutral | None | None | None | None | N |
E/Y | 0.6143 | likely_pathogenic | 0.6172 | pathogenic | -0.027 | Destabilizing | 0.981 | D | 0.699 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.