Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31181 | 93766;93767;93768 | chr2:178548085;178548084;178548083 | chr2:179412812;179412811;179412810 |
N2AB | 29540 | 88843;88844;88845 | chr2:178548085;178548084;178548083 | chr2:179412812;179412811;179412810 |
N2A | 28613 | 86062;86063;86064 | chr2:178548085;178548084;178548083 | chr2:179412812;179412811;179412810 |
N2B | 22116 | 66571;66572;66573 | chr2:178548085;178548084;178548083 | chr2:179412812;179412811;179412810 |
Novex-1 | 22241 | 66946;66947;66948 | chr2:178548085;178548084;178548083 | chr2:179412812;179412811;179412810 |
Novex-2 | 22308 | 67147;67148;67149 | chr2:178548085;178548084;178548083 | chr2:179412812;179412811;179412810 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1243301263 | -0.569 | 0.999 | N | 0.613 | 0.408 | 0.36036328697 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
E/K | rs1243301263 | -0.569 | 0.999 | N | 0.613 | 0.408 | 0.36036328697 | gnomAD-4.0.0 | 1.59112E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77269E-05 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | None | None | 1.0 | D | 0.632 | 0.336 | 0.39619538035 | gnomAD-4.0.0 | 1.59112E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88239E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2273 | likely_benign | 0.1923 | benign | -1.048 | Destabilizing | 0.999 | D | 0.699 | prob.neutral | N | 0.46977585 | None | None | N |
E/C | 0.94 | likely_pathogenic | 0.9295 | pathogenic | -0.57 | Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
E/D | 0.4884 | ambiguous | 0.503 | ambiguous | -1.263 | Destabilizing | 0.999 | D | 0.497 | neutral | N | 0.472725138 | None | None | N |
E/F | 0.9448 | likely_pathogenic | 0.9387 | pathogenic | -0.364 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
E/G | 0.4624 | ambiguous | 0.4125 | ambiguous | -1.467 | Destabilizing | 1.0 | D | 0.744 | deleterious | N | 0.480082198 | None | None | N |
E/H | 0.8457 | likely_pathogenic | 0.8174 | pathogenic | -0.639 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
E/I | 0.5833 | likely_pathogenic | 0.5325 | ambiguous | 0.123 | Stabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
E/K | 0.4681 | ambiguous | 0.3886 | ambiguous | -0.827 | Destabilizing | 0.999 | D | 0.613 | neutral | N | 0.508187237 | None | None | N |
E/L | 0.7082 | likely_pathogenic | 0.6724 | pathogenic | 0.123 | Stabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
E/M | 0.6791 | likely_pathogenic | 0.6271 | pathogenic | 0.693 | Stabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
E/N | 0.6422 | likely_pathogenic | 0.6186 | pathogenic | -1.338 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
E/P | 0.7043 | likely_pathogenic | 0.6796 | pathogenic | -0.247 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
E/Q | 0.267 | likely_benign | 0.2348 | benign | -1.156 | Destabilizing | 1.0 | D | 0.632 | neutral | D | 0.522887331 | None | None | N |
E/R | 0.6316 | likely_pathogenic | 0.5467 | ambiguous | -0.566 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | N |
E/S | 0.4078 | ambiguous | 0.3727 | ambiguous | -1.785 | Destabilizing | 0.999 | D | 0.663 | neutral | None | None | None | None | N |
E/T | 0.3881 | ambiguous | 0.3467 | ambiguous | -1.419 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
E/V | 0.3606 | ambiguous | 0.3058 | benign | -0.247 | Destabilizing | 1.0 | D | 0.78 | deleterious | N | 0.470296055 | None | None | N |
E/W | 0.9832 | likely_pathogenic | 0.9805 | pathogenic | -0.1 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
E/Y | 0.9163 | likely_pathogenic | 0.9083 | pathogenic | -0.084 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.