Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31183 | 93772;93773;93774 | chr2:178548079;178548078;178548077 | chr2:179412806;179412805;179412804 |
N2AB | 29542 | 88849;88850;88851 | chr2:178548079;178548078;178548077 | chr2:179412806;179412805;179412804 |
N2A | 28615 | 86068;86069;86070 | chr2:178548079;178548078;178548077 | chr2:179412806;179412805;179412804 |
N2B | 22118 | 66577;66578;66579 | chr2:178548079;178548078;178548077 | chr2:179412806;179412805;179412804 |
Novex-1 | 22243 | 66952;66953;66954 | chr2:178548079;178548078;178548077 | chr2:179412806;179412805;179412804 |
Novex-2 | 22310 | 67153;67154;67155 | chr2:178548079;178548078;178548077 | chr2:179412806;179412805;179412804 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.994 | N | 0.653 | 0.477 | 0.476364732183 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3382 | likely_benign | 0.2757 | benign | -1.481 | Destabilizing | 0.994 | D | 0.591 | neutral | N | 0.480560706 | None | None | N |
E/C | 0.8904 | likely_pathogenic | 0.872 | pathogenic | -0.846 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
E/D | 0.2841 | likely_benign | 0.3141 | benign | -1.676 | Destabilizing | 0.104 | N | 0.257 | neutral | N | 0.479733986 | None | None | N |
E/F | 0.829 | likely_pathogenic | 0.8391 | pathogenic | -1.038 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
E/G | 0.557 | ambiguous | 0.4945 | ambiguous | -1.906 | Destabilizing | 0.994 | D | 0.653 | neutral | N | 0.512230407 | None | None | N |
E/H | 0.6801 | likely_pathogenic | 0.6414 | pathogenic | -1.083 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | N |
E/I | 0.4811 | ambiguous | 0.4239 | ambiguous | -0.261 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
E/K | 0.5223 | ambiguous | 0.4066 | ambiguous | -1.508 | Destabilizing | 0.994 | D | 0.571 | neutral | N | 0.447370852 | None | None | N |
E/L | 0.6006 | likely_pathogenic | 0.555 | ambiguous | -0.261 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
E/M | 0.5944 | likely_pathogenic | 0.5335 | ambiguous | 0.467 | Stabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
E/N | 0.5622 | ambiguous | 0.5688 | pathogenic | -1.788 | Destabilizing | 0.998 | D | 0.65 | neutral | None | None | None | None | N |
E/P | 0.9935 | likely_pathogenic | 0.9922 | pathogenic | -0.652 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
E/Q | 0.2245 | likely_benign | 0.1823 | benign | -1.495 | Destabilizing | 0.998 | D | 0.668 | neutral | N | 0.443234469 | None | None | N |
E/R | 0.6161 | likely_pathogenic | 0.5187 | ambiguous | -1.319 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | None | None | None | None | N |
E/S | 0.3777 | ambiguous | 0.3398 | benign | -2.46 | Highly Destabilizing | 0.992 | D | 0.55 | neutral | None | None | None | None | N |
E/T | 0.3846 | ambiguous | 0.3361 | benign | -2.061 | Highly Destabilizing | 0.999 | D | 0.695 | prob.neutral | None | None | None | None | N |
E/V | 0.3445 | ambiguous | 0.2843 | benign | -0.652 | Destabilizing | 0.999 | D | 0.738 | prob.delet. | N | 0.426264861 | None | None | N |
E/W | 0.9552 | likely_pathogenic | 0.9501 | pathogenic | -1.046 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
E/Y | 0.7759 | likely_pathogenic | 0.7785 | pathogenic | -0.832 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.