Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31187 | 93784;93785;93786 | chr2:178548067;178548066;178548065 | chr2:179412794;179412793;179412792 |
N2AB | 29546 | 88861;88862;88863 | chr2:178548067;178548066;178548065 | chr2:179412794;179412793;179412792 |
N2A | 28619 | 86080;86081;86082 | chr2:178548067;178548066;178548065 | chr2:179412794;179412793;179412792 |
N2B | 22122 | 66589;66590;66591 | chr2:178548067;178548066;178548065 | chr2:179412794;179412793;179412792 |
Novex-1 | 22247 | 66964;66965;66966 | chr2:178548067;178548066;178548065 | chr2:179412794;179412793;179412792 |
Novex-2 | 22314 | 67165;67166;67167 | chr2:178548067;178548066;178548065 | chr2:179412794;179412793;179412792 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs1166582202 | None | 0.982 | N | 0.715 | 0.147 | 0.162503812791 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/N | rs1166582202 | None | 0.982 | N | 0.715 | 0.147 | 0.162503812791 | gnomAD-4.0.0 | 6.57514E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47029E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6215 | likely_pathogenic | 0.6261 | pathogenic | -1.82 | Destabilizing | 0.953 | D | 0.607 | neutral | None | None | None | None | N |
K/C | 0.6203 | likely_pathogenic | 0.6869 | pathogenic | -1.847 | Destabilizing | 0.999 | D | 0.795 | deleterious | None | None | None | None | N |
K/D | 0.9675 | likely_pathogenic | 0.9676 | pathogenic | -2.227 | Highly Destabilizing | 0.993 | D | 0.735 | prob.delet. | None | None | None | None | N |
K/E | 0.5979 | likely_pathogenic | 0.5764 | pathogenic | -1.953 | Destabilizing | 0.939 | D | 0.622 | neutral | N | 0.508995314 | None | None | N |
K/F | 0.801 | likely_pathogenic | 0.8403 | pathogenic | -0.951 | Destabilizing | 0.999 | D | 0.809 | deleterious | None | None | None | None | N |
K/G | 0.8264 | likely_pathogenic | 0.8338 | pathogenic | -2.234 | Highly Destabilizing | 0.993 | D | 0.725 | prob.delet. | None | None | None | None | N |
K/H | 0.4978 | ambiguous | 0.5162 | ambiguous | -2.395 | Highly Destabilizing | 0.998 | D | 0.765 | deleterious | None | None | None | None | N |
K/I | 0.5202 | ambiguous | 0.5364 | ambiguous | -0.639 | Destabilizing | 0.993 | D | 0.813 | deleterious | None | None | None | None | N |
K/L | 0.5042 | ambiguous | 0.5217 | ambiguous | -0.639 | Destabilizing | 0.986 | D | 0.725 | prob.delet. | None | None | None | None | N |
K/M | 0.2654 | likely_benign | 0.2689 | benign | -1.077 | Destabilizing | 0.999 | D | 0.747 | deleterious | N | 0.440791596 | None | None | N |
K/N | 0.8769 | likely_pathogenic | 0.8891 | pathogenic | -2.15 | Highly Destabilizing | 0.982 | D | 0.715 | prob.delet. | N | 0.468686213 | None | None | N |
K/P | 0.9967 | likely_pathogenic | 0.9964 | pathogenic | -1.016 | Destabilizing | 0.998 | D | 0.757 | deleterious | None | None | None | None | N |
K/Q | 0.2174 | likely_benign | 0.2207 | benign | -1.751 | Destabilizing | 0.982 | D | 0.719 | prob.delet. | N | 0.485731665 | None | None | N |
K/R | 0.0803 | likely_benign | 0.087 | benign | -1.759 | Destabilizing | 0.046 | N | 0.308 | neutral | N | 0.390418704 | None | None | N |
K/S | 0.7037 | likely_pathogenic | 0.7255 | pathogenic | -2.582 | Highly Destabilizing | 0.953 | D | 0.658 | neutral | None | None | None | None | N |
K/T | 0.4133 | ambiguous | 0.4095 | ambiguous | -2.095 | Highly Destabilizing | 0.991 | D | 0.707 | prob.neutral | N | 0.451717879 | None | None | N |
K/V | 0.469 | ambiguous | 0.4841 | ambiguous | -1.016 | Destabilizing | 0.993 | D | 0.753 | deleterious | None | None | None | None | N |
K/W | 0.7867 | likely_pathogenic | 0.8045 | pathogenic | -1.127 | Destabilizing | 0.999 | D | 0.775 | deleterious | None | None | None | None | N |
K/Y | 0.6964 | likely_pathogenic | 0.732 | pathogenic | -0.819 | Destabilizing | 0.998 | D | 0.793 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.