Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC3119193796;93797;93798 chr2:178548055;178548054;178548053chr2:179412782;179412781;179412780
N2AB2955088873;88874;88875 chr2:178548055;178548054;178548053chr2:179412782;179412781;179412780
N2A2862386092;86093;86094 chr2:178548055;178548054;178548053chr2:179412782;179412781;179412780
N2B2212666601;66602;66603 chr2:178548055;178548054;178548053chr2:179412782;179412781;179412780
Novex-12225166976;66977;66978 chr2:178548055;178548054;178548053chr2:179412782;179412781;179412780
Novex-22231867177;67178;67179 chr2:178548055;178548054;178548053chr2:179412782;179412781;179412780
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: D
  • RefSeq wild type transcript codon: GAT
  • RefSeq wild type template codon: CTA
  • Domain: Fn3-115
  • Domain position: 79
  • Structural Position: 113
  • Q(SASA): 0.6774
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
D/E rs965506398 0.051 0.928 N 0.354 0.13 0.0551355673512 gnomAD-2.1.1 8.03E-06 None None None None I None 0 5.8E-05 None 0 0 None 0 None 0 0 0
D/E rs965506398 0.051 0.928 N 0.354 0.13 0.0551355673512 gnomAD-4.0.0 6.36422E-06 None None None None I None 0 4.5731E-05 None 0 0 None 0 0 5.71576E-06 0 0
D/Y None None 0.999 N 0.634 0.273 0.542187413537 gnomAD-4.0.0 1.20032E-06 None None None None I None 0 0 None 0 0 None 0 0 1.3125E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
D/A 0.1827 likely_benign 0.1648 benign -0.08 Destabilizing 0.978 D 0.527 neutral N 0.425184639 None None I
D/C 0.7488 likely_pathogenic 0.7099 pathogenic 0.354 Stabilizing 0.999 D 0.705 prob.neutral None None None None I
D/E 0.1392 likely_benign 0.1373 benign -0.172 Destabilizing 0.928 D 0.354 neutral N 0.430649173 None None I
D/F 0.6789 likely_pathogenic 0.6278 pathogenic -0.328 Destabilizing 0.999 D 0.637 neutral None None None None I
D/G 0.3035 likely_benign 0.2766 benign -0.205 Destabilizing 0.865 D 0.571 neutral N 0.468143195 None None I
D/H 0.367 ambiguous 0.306 benign -0.138 Destabilizing 0.994 D 0.607 neutral N 0.454662184 None None I
D/I 0.3989 ambiguous 0.3415 ambiguous 0.179 Stabilizing 0.992 D 0.65 neutral None None None None I
D/K 0.4676 ambiguous 0.3877 ambiguous 0.628 Stabilizing 0.968 D 0.58 neutral None None None None I
D/L 0.4379 ambiguous 0.375 ambiguous 0.179 Stabilizing 0.983 D 0.615 neutral None None None None I
D/M 0.6216 likely_pathogenic 0.566 pathogenic 0.354 Stabilizing 0.999 D 0.669 neutral None None None None I
D/N 0.1374 likely_benign 0.1114 benign 0.513 Stabilizing 0.085 N 0.439 neutral N 0.475882818 None None I
D/P 0.8701 likely_pathogenic 0.8256 pathogenic 0.112 Stabilizing 0.992 D 0.619 neutral None None None None I
D/Q 0.373 ambiguous 0.3258 benign 0.494 Stabilizing 0.983 D 0.639 neutral None None None None I
D/R 0.5147 ambiguous 0.4267 ambiguous 0.616 Stabilizing 0.983 D 0.61 neutral None None None None I
D/S 0.1708 likely_benign 0.149 benign 0.415 Stabilizing 0.895 D 0.56 neutral None None None None I
D/T 0.2828 likely_benign 0.2506 benign 0.509 Stabilizing 0.983 D 0.581 neutral None None None None I
D/V 0.2447 likely_benign 0.2153 benign 0.112 Stabilizing 0.989 D 0.616 neutral N 0.454950185 None None I
D/W 0.933 likely_pathogenic 0.9076 pathogenic -0.309 Destabilizing 0.999 D 0.726 prob.delet. None None None None I
D/Y 0.334 likely_benign 0.2851 benign -0.108 Destabilizing 0.999 D 0.634 neutral N 0.471648727 None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.