Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31191 | 93796;93797;93798 | chr2:178548055;178548054;178548053 | chr2:179412782;179412781;179412780 |
N2AB | 29550 | 88873;88874;88875 | chr2:178548055;178548054;178548053 | chr2:179412782;179412781;179412780 |
N2A | 28623 | 86092;86093;86094 | chr2:178548055;178548054;178548053 | chr2:179412782;179412781;179412780 |
N2B | 22126 | 66601;66602;66603 | chr2:178548055;178548054;178548053 | chr2:179412782;179412781;179412780 |
Novex-1 | 22251 | 66976;66977;66978 | chr2:178548055;178548054;178548053 | chr2:179412782;179412781;179412780 |
Novex-2 | 22318 | 67177;67178;67179 | chr2:178548055;178548054;178548053 | chr2:179412782;179412781;179412780 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs965506398 | 0.051 | 0.928 | N | 0.354 | 0.13 | 0.0551355673512 | gnomAD-2.1.1 | 8.03E-06 | None | None | None | None | I | None | 0 | 5.8E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
D/E | rs965506398 | 0.051 | 0.928 | N | 0.354 | 0.13 | 0.0551355673512 | gnomAD-4.0.0 | 6.36422E-06 | None | None | None | None | I | None | 0 | 4.5731E-05 | None | 0 | 0 | None | 0 | 0 | 5.71576E-06 | 0 | 0 |
D/Y | None | None | 0.999 | N | 0.634 | 0.273 | 0.542187413537 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1827 | likely_benign | 0.1648 | benign | -0.08 | Destabilizing | 0.978 | D | 0.527 | neutral | N | 0.425184639 | None | None | I |
D/C | 0.7488 | likely_pathogenic | 0.7099 | pathogenic | 0.354 | Stabilizing | 0.999 | D | 0.705 | prob.neutral | None | None | None | None | I |
D/E | 0.1392 | likely_benign | 0.1373 | benign | -0.172 | Destabilizing | 0.928 | D | 0.354 | neutral | N | 0.430649173 | None | None | I |
D/F | 0.6789 | likely_pathogenic | 0.6278 | pathogenic | -0.328 | Destabilizing | 0.999 | D | 0.637 | neutral | None | None | None | None | I |
D/G | 0.3035 | likely_benign | 0.2766 | benign | -0.205 | Destabilizing | 0.865 | D | 0.571 | neutral | N | 0.468143195 | None | None | I |
D/H | 0.367 | ambiguous | 0.306 | benign | -0.138 | Destabilizing | 0.994 | D | 0.607 | neutral | N | 0.454662184 | None | None | I |
D/I | 0.3989 | ambiguous | 0.3415 | ambiguous | 0.179 | Stabilizing | 0.992 | D | 0.65 | neutral | None | None | None | None | I |
D/K | 0.4676 | ambiguous | 0.3877 | ambiguous | 0.628 | Stabilizing | 0.968 | D | 0.58 | neutral | None | None | None | None | I |
D/L | 0.4379 | ambiguous | 0.375 | ambiguous | 0.179 | Stabilizing | 0.983 | D | 0.615 | neutral | None | None | None | None | I |
D/M | 0.6216 | likely_pathogenic | 0.566 | pathogenic | 0.354 | Stabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | I |
D/N | 0.1374 | likely_benign | 0.1114 | benign | 0.513 | Stabilizing | 0.085 | N | 0.439 | neutral | N | 0.475882818 | None | None | I |
D/P | 0.8701 | likely_pathogenic | 0.8256 | pathogenic | 0.112 | Stabilizing | 0.992 | D | 0.619 | neutral | None | None | None | None | I |
D/Q | 0.373 | ambiguous | 0.3258 | benign | 0.494 | Stabilizing | 0.983 | D | 0.639 | neutral | None | None | None | None | I |
D/R | 0.5147 | ambiguous | 0.4267 | ambiguous | 0.616 | Stabilizing | 0.983 | D | 0.61 | neutral | None | None | None | None | I |
D/S | 0.1708 | likely_benign | 0.149 | benign | 0.415 | Stabilizing | 0.895 | D | 0.56 | neutral | None | None | None | None | I |
D/T | 0.2828 | likely_benign | 0.2506 | benign | 0.509 | Stabilizing | 0.983 | D | 0.581 | neutral | None | None | None | None | I |
D/V | 0.2447 | likely_benign | 0.2153 | benign | 0.112 | Stabilizing | 0.989 | D | 0.616 | neutral | N | 0.454950185 | None | None | I |
D/W | 0.933 | likely_pathogenic | 0.9076 | pathogenic | -0.309 | Destabilizing | 0.999 | D | 0.726 | prob.delet. | None | None | None | None | I |
D/Y | 0.334 | likely_benign | 0.2851 | benign | -0.108 | Destabilizing | 0.999 | D | 0.634 | neutral | N | 0.471648727 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.