Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31204 | 93835;93836;93837 | chr2:178548016;178548015;178548014 | chr2:179412743;179412742;179412741 |
N2AB | 29563 | 88912;88913;88914 | chr2:178548016;178548015;178548014 | chr2:179412743;179412742;179412741 |
N2A | 28636 | 86131;86132;86133 | chr2:178548016;178548015;178548014 | chr2:179412743;179412742;179412741 |
N2B | 22139 | 66640;66641;66642 | chr2:178548016;178548015;178548014 | chr2:179412743;179412742;179412741 |
Novex-1 | 22264 | 67015;67016;67017 | chr2:178548016;178548015;178548014 | chr2:179412743;179412742;179412741 |
Novex-2 | 22331 | 67216;67217;67218 | chr2:178548016;178548015;178548014 | chr2:179412743;179412742;179412741 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs750367979 | 0.533 | 0.994 | N | 0.592 | 0.199 | 0.548443230319 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | N | None | 0 | 5.8E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/I | rs750367979 | 0.533 | 0.994 | N | 0.592 | 0.199 | 0.548443230319 | gnomAD-4.0.0 | 3.18249E-06 | None | None | None | None | N | None | 0 | 4.57373E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4786 | ambiguous | 0.5431 | ambiguous | -1.456 | Destabilizing | 0.997 | D | 0.655 | prob.neutral | N | 0.486164449 | None | None | N |
V/C | 0.8797 | likely_pathogenic | 0.9143 | pathogenic | -1.139 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
V/D | 0.9311 | likely_pathogenic | 0.9491 | pathogenic | -1.174 | Destabilizing | 0.999 | D | 0.897 | deleterious | N | 0.487178407 | None | None | N |
V/E | 0.8538 | likely_pathogenic | 0.8757 | pathogenic | -1.012 | Destabilizing | 0.999 | D | 0.902 | deleterious | None | None | None | None | N |
V/F | 0.3936 | ambiguous | 0.4126 | ambiguous | -0.778 | Destabilizing | 0.999 | D | 0.837 | deleterious | N | 0.475061633 | None | None | N |
V/G | 0.7098 | likely_pathogenic | 0.7583 | pathogenic | -1.931 | Destabilizing | 0.999 | D | 0.899 | deleterious | N | 0.487178407 | None | None | N |
V/H | 0.9333 | likely_pathogenic | 0.9524 | pathogenic | -1.438 | Destabilizing | 1.0 | D | 0.9 | deleterious | None | None | None | None | N |
V/I | 0.0824 | likely_benign | 0.0854 | benign | -0.183 | Destabilizing | 0.994 | D | 0.592 | neutral | N | 0.491790846 | None | None | N |
V/K | 0.8666 | likely_pathogenic | 0.8888 | pathogenic | -1.137 | Destabilizing | 0.999 | D | 0.901 | deleterious | None | None | None | None | N |
V/L | 0.3766 | ambiguous | 0.4209 | ambiguous | -0.183 | Destabilizing | 0.994 | D | 0.626 | neutral | N | 0.517822654 | None | None | N |
V/M | 0.2588 | likely_benign | 0.2836 | benign | -0.314 | Destabilizing | 0.999 | D | 0.665 | prob.neutral | None | None | None | None | N |
V/N | 0.8358 | likely_pathogenic | 0.8875 | pathogenic | -1.324 | Destabilizing | 0.999 | D | 0.911 | deleterious | None | None | None | None | N |
V/P | 0.9586 | likely_pathogenic | 0.9744 | pathogenic | -0.575 | Destabilizing | 0.999 | D | 0.893 | deleterious | None | None | None | None | N |
V/Q | 0.816 | likely_pathogenic | 0.8569 | pathogenic | -1.202 | Destabilizing | 0.999 | D | 0.901 | deleterious | None | None | None | None | N |
V/R | 0.8348 | likely_pathogenic | 0.8576 | pathogenic | -0.975 | Destabilizing | 0.999 | D | 0.909 | deleterious | None | None | None | None | N |
V/S | 0.7135 | likely_pathogenic | 0.7893 | pathogenic | -2.011 | Highly Destabilizing | 0.999 | D | 0.895 | deleterious | None | None | None | None | N |
V/T | 0.4861 | ambiguous | 0.5752 | pathogenic | -1.691 | Destabilizing | 0.998 | D | 0.562 | neutral | None | None | None | None | N |
V/W | 0.9676 | likely_pathogenic | 0.9761 | pathogenic | -1.112 | Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
V/Y | 0.8651 | likely_pathogenic | 0.8893 | pathogenic | -0.714 | Destabilizing | 0.999 | D | 0.82 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.