Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31228 | 93907;93908;93909 | chr2:178547944;178547943;178547942 | chr2:179412671;179412670;179412669 |
N2AB | 29587 | 88984;88985;88986 | chr2:178547944;178547943;178547942 | chr2:179412671;179412670;179412669 |
N2A | 28660 | 86203;86204;86205 | chr2:178547944;178547943;178547942 | chr2:179412671;179412670;179412669 |
N2B | 22163 | 66712;66713;66714 | chr2:178547944;178547943;178547942 | chr2:179412671;179412670;179412669 |
Novex-1 | 22288 | 67087;67088;67089 | chr2:178547944;178547943;178547942 | chr2:179412671;179412670;179412669 |
Novex-2 | 22355 | 67288;67289;67290 | chr2:178547944;178547943;178547942 | chr2:179412671;179412670;179412669 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs368714667 | 0.184 | 0.928 | N | 0.613 | 0.185 | None | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
K/R | rs368714667 | 0.184 | 0.928 | N | 0.613 | 0.185 | None | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
K/R | rs368714667 | 0.184 | 0.928 | N | 0.613 | 0.185 | None | gnomAD-4.0.0 | 3.40838E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.66174E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.8335 | likely_pathogenic | 0.8207 | pathogenic | -0.117 | Destabilizing | 0.944 | D | 0.681 | prob.neutral | None | None | None | None | I |
K/C | 0.9275 | likely_pathogenic | 0.9182 | pathogenic | -0.292 | Destabilizing | 0.999 | D | 0.741 | deleterious | None | None | None | None | I |
K/D | 0.952 | likely_pathogenic | 0.9463 | pathogenic | 0.103 | Stabilizing | 0.968 | D | 0.646 | neutral | None | None | None | None | I |
K/E | 0.6971 | likely_pathogenic | 0.6615 | pathogenic | 0.108 | Stabilizing | 0.928 | D | 0.63 | neutral | N | 0.484313658 | None | None | I |
K/F | 0.9586 | likely_pathogenic | 0.9464 | pathogenic | -0.367 | Destabilizing | 0.999 | D | 0.704 | prob.neutral | None | None | None | None | I |
K/G | 0.8895 | likely_pathogenic | 0.8888 | pathogenic | -0.311 | Destabilizing | 0.895 | D | 0.652 | neutral | None | None | None | None | I |
K/H | 0.6259 | likely_pathogenic | 0.5777 | pathogenic | -0.601 | Destabilizing | 0.996 | D | 0.649 | neutral | None | None | None | None | I |
K/I | 0.7805 | likely_pathogenic | 0.744 | pathogenic | 0.313 | Stabilizing | 0.989 | D | 0.717 | prob.delet. | N | 0.490202688 | None | None | I |
K/L | 0.7038 | likely_pathogenic | 0.6851 | pathogenic | 0.313 | Stabilizing | 0.992 | D | 0.631 | neutral | None | None | None | None | I |
K/M | 0.6559 | likely_pathogenic | 0.624 | pathogenic | 0.192 | Stabilizing | 0.999 | D | 0.661 | neutral | None | None | None | None | I |
K/N | 0.9162 | likely_pathogenic | 0.9021 | pathogenic | 0.137 | Stabilizing | 0.085 | N | 0.398 | neutral | N | 0.503178381 | None | None | I |
K/P | 0.8578 | likely_pathogenic | 0.847 | pathogenic | 0.197 | Stabilizing | 0.992 | D | 0.661 | neutral | None | None | None | None | I |
K/Q | 0.3658 | ambiguous | 0.3379 | benign | -0.05 | Destabilizing | 0.978 | D | 0.677 | prob.neutral | N | 0.493517143 | None | None | I |
K/R | 0.0894 | likely_benign | 0.0881 | benign | -0.063 | Destabilizing | 0.928 | D | 0.613 | neutral | N | 0.453905327 | None | None | I |
K/S | 0.8974 | likely_pathogenic | 0.8826 | pathogenic | -0.392 | Destabilizing | 0.895 | D | 0.65 | neutral | None | None | None | None | I |
K/T | 0.6655 | likely_pathogenic | 0.6381 | pathogenic | -0.235 | Destabilizing | 0.978 | D | 0.637 | neutral | N | 0.483174796 | None | None | I |
K/V | 0.7326 | likely_pathogenic | 0.7078 | pathogenic | 0.197 | Stabilizing | 0.992 | D | 0.699 | prob.neutral | None | None | None | None | I |
K/W | 0.9471 | likely_pathogenic | 0.9297 | pathogenic | -0.356 | Destabilizing | 0.999 | D | 0.737 | prob.delet. | None | None | None | None | I |
K/Y | 0.9082 | likely_pathogenic | 0.8842 | pathogenic | -0.001 | Destabilizing | 0.997 | D | 0.701 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.