Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31253 | 93982;93983;93984 | chr2:178547869;178547868;178547867 | chr2:179412596;179412595;179412594 |
N2AB | 29612 | 89059;89060;89061 | chr2:178547869;178547868;178547867 | chr2:179412596;179412595;179412594 |
N2A | 28685 | 86278;86279;86280 | chr2:178547869;178547868;178547867 | chr2:179412596;179412595;179412594 |
N2B | 22188 | 66787;66788;66789 | chr2:178547869;178547868;178547867 | chr2:179412596;179412595;179412594 |
Novex-1 | 22313 | 67162;67163;67164 | chr2:178547869;178547868;178547867 | chr2:179412596;179412595;179412594 |
Novex-2 | 22380 | 67363;67364;67365 | chr2:178547869;178547868;178547867 | chr2:179412596;179412595;179412594 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs767771567 | 0.261 | 0.998 | N | 0.539 | 0.351 | 0.215869574891 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
E/K | rs767771567 | 0.261 | 0.998 | N | 0.539 | 0.351 | 0.215869574891 | gnomAD-4.0.0 | 3.1823E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71579E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2573 | likely_benign | 0.2757 | benign | -0.305 | Destabilizing | 0.998 | D | 0.614 | neutral | N | 0.483933793 | None | None | N |
E/C | 0.9343 | likely_pathogenic | 0.9391 | pathogenic | -0.346 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
E/D | 0.1085 | likely_benign | 0.1042 | benign | -0.314 | Destabilizing | 0.434 | N | 0.29 | neutral | N | 0.394850584 | None | None | N |
E/F | 0.9149 | likely_pathogenic | 0.9238 | pathogenic | 0.002 | Stabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | N |
E/G | 0.1728 | likely_benign | 0.1935 | benign | -0.502 | Destabilizing | 0.999 | D | 0.624 | neutral | N | 0.378411333 | None | None | N |
E/H | 0.6896 | likely_pathogenic | 0.7013 | pathogenic | 0.513 | Stabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
E/I | 0.7086 | likely_pathogenic | 0.7207 | pathogenic | 0.183 | Stabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
E/K | 0.331 | likely_benign | 0.3411 | ambiguous | 0.263 | Stabilizing | 0.998 | D | 0.539 | neutral | N | 0.467174829 | None | None | N |
E/L | 0.7016 | likely_pathogenic | 0.718 | pathogenic | 0.183 | Stabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
E/M | 0.6732 | likely_pathogenic | 0.6827 | pathogenic | 0.036 | Stabilizing | 1.0 | D | 0.605 | neutral | None | None | None | None | N |
E/N | 0.27 | likely_benign | 0.2535 | benign | -0.231 | Destabilizing | 0.999 | D | 0.693 | prob.neutral | None | None | None | None | N |
E/P | 0.7785 | likely_pathogenic | 0.8158 | pathogenic | 0.04 | Stabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
E/Q | 0.2696 | likely_benign | 0.2734 | benign | -0.152 | Destabilizing | 0.999 | D | 0.659 | neutral | N | 0.508618807 | None | None | N |
E/R | 0.5151 | ambiguous | 0.5386 | ambiguous | 0.629 | Stabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
E/S | 0.2996 | likely_benign | 0.2971 | benign | -0.378 | Destabilizing | 0.997 | D | 0.568 | neutral | None | None | None | None | N |
E/T | 0.3646 | ambiguous | 0.3772 | ambiguous | -0.2 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | N |
E/V | 0.4799 | ambiguous | 0.4992 | ambiguous | 0.04 | Stabilizing | 1.0 | D | 0.647 | neutral | N | 0.460251244 | None | None | N |
E/W | 0.9573 | likely_pathogenic | 0.9636 | pathogenic | 0.189 | Stabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
E/Y | 0.783 | likely_pathogenic | 0.7945 | pathogenic | 0.253 | Stabilizing | 1.0 | D | 0.615 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.