Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31258 | 93997;93998;93999 | chr2:178547854;178547853;178547852 | chr2:179412581;179412580;179412579 |
N2AB | 29617 | 89074;89075;89076 | chr2:178547854;178547853;178547852 | chr2:179412581;179412580;179412579 |
N2A | 28690 | 86293;86294;86295 | chr2:178547854;178547853;178547852 | chr2:179412581;179412580;179412579 |
N2B | 22193 | 66802;66803;66804 | chr2:178547854;178547853;178547852 | chr2:179412581;179412580;179412579 |
Novex-1 | 22318 | 67177;67178;67179 | chr2:178547854;178547853;178547852 | chr2:179412581;179412580;179412579 |
Novex-2 | 22385 | 67378;67379;67380 | chr2:178547854;178547853;178547852 | chr2:179412581;179412580;179412579 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs994627256 | None | 0.201 | N | 0.416 | 0.277 | 0.36256342048 | gnomAD-4.0.0 | 1.59112E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85788E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1478 | likely_benign | 0.1432 | benign | -0.249 | Destabilizing | 0.334 | N | 0.469 | neutral | N | 0.495271947 | None | None | N |
E/C | 0.8665 | likely_pathogenic | 0.8895 | pathogenic | -0.078 | Destabilizing | 0.982 | D | 0.621 | neutral | None | None | None | None | N |
E/D | 0.1777 | likely_benign | 0.1805 | benign | -0.337 | Destabilizing | 0.002 | N | 0.265 | neutral | N | 0.516167294 | None | None | N |
E/F | 0.8516 | likely_pathogenic | 0.8627 | pathogenic | -0.057 | Destabilizing | 0.982 | D | 0.619 | neutral | None | None | None | None | N |
E/G | 0.1635 | likely_benign | 0.1804 | benign | -0.442 | Destabilizing | 0.334 | N | 0.492 | neutral | D | 0.52584557 | None | None | N |
E/H | 0.5922 | likely_pathogenic | 0.6157 | pathogenic | 0.288 | Stabilizing | 0.947 | D | 0.502 | neutral | None | None | None | None | N |
E/I | 0.4596 | ambiguous | 0.4475 | ambiguous | 0.224 | Stabilizing | 0.826 | D | 0.645 | neutral | None | None | None | None | N |
E/K | 0.2115 | likely_benign | 0.2003 | benign | 0.481 | Stabilizing | 0.201 | N | 0.416 | neutral | N | 0.491088061 | None | None | N |
E/L | 0.4774 | ambiguous | 0.4707 | ambiguous | 0.224 | Stabilizing | 0.826 | D | 0.629 | neutral | None | None | None | None | N |
E/M | 0.5018 | ambiguous | 0.494 | ambiguous | 0.18 | Stabilizing | 0.982 | D | 0.563 | neutral | None | None | None | None | N |
E/N | 0.2924 | likely_benign | 0.3015 | benign | 0.011 | Stabilizing | 0.539 | D | 0.456 | neutral | None | None | None | None | N |
E/P | 0.3491 | ambiguous | 0.3218 | benign | 0.087 | Stabilizing | 0.826 | D | 0.574 | neutral | None | None | None | None | N |
E/Q | 0.161 | likely_benign | 0.1581 | benign | 0.072 | Stabilizing | 0.043 | N | 0.233 | neutral | N | 0.490154129 | None | None | N |
E/R | 0.3488 | ambiguous | 0.3464 | ambiguous | 0.7 | Stabilizing | 0.7 | D | 0.499 | neutral | None | None | None | None | N |
E/S | 0.2482 | likely_benign | 0.2562 | benign | -0.096 | Destabilizing | 0.25 | N | 0.422 | neutral | None | None | None | None | N |
E/T | 0.2657 | likely_benign | 0.269 | benign | 0.073 | Stabilizing | 0.7 | D | 0.515 | neutral | None | None | None | None | N |
E/V | 0.2481 | likely_benign | 0.2346 | benign | 0.087 | Stabilizing | 0.781 | D | 0.588 | neutral | D | 0.535369131 | None | None | N |
E/W | 0.9375 | likely_pathogenic | 0.9439 | pathogenic | 0.1 | Stabilizing | 0.982 | D | 0.623 | neutral | None | None | None | None | N |
E/Y | 0.7268 | likely_pathogenic | 0.7432 | pathogenic | 0.196 | Stabilizing | 0.935 | D | 0.584 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.