Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31259 | 94000;94001;94002 | chr2:178547851;178547850;178547849 | chr2:179412578;179412577;179412576 |
N2AB | 29618 | 89077;89078;89079 | chr2:178547851;178547850;178547849 | chr2:179412578;179412577;179412576 |
N2A | 28691 | 86296;86297;86298 | chr2:178547851;178547850;178547849 | chr2:179412578;179412577;179412576 |
N2B | 22194 | 66805;66806;66807 | chr2:178547851;178547850;178547849 | chr2:179412578;179412577;179412576 |
Novex-1 | 22319 | 67180;67181;67182 | chr2:178547851;178547850;178547849 | chr2:179412578;179412577;179412576 |
Novex-2 | 22386 | 67381;67382;67383 | chr2:178547851;178547850;178547849 | chr2:179412578;179412577;179412576 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.981 | N | 0.455 | 0.288 | 0.202949470691 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2858 | likely_benign | 0.3189 | benign | -0.302 | Destabilizing | 0.981 | D | 0.455 | neutral | N | 0.514216627 | None | None | N |
T/C | 0.8003 | likely_pathogenic | 0.8103 | pathogenic | -0.22 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
T/D | 0.4849 | ambiguous | 0.4783 | ambiguous | 0.112 | Stabilizing | 0.999 | D | 0.667 | neutral | None | None | None | None | N |
T/E | 0.6905 | likely_pathogenic | 0.7021 | pathogenic | 0.027 | Stabilizing | 0.999 | D | 0.66 | neutral | None | None | None | None | N |
T/F | 0.7949 | likely_pathogenic | 0.8094 | pathogenic | -0.83 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
T/G | 0.3517 | ambiguous | 0.3518 | ambiguous | -0.416 | Destabilizing | 0.997 | D | 0.601 | neutral | None | None | None | None | N |
T/H | 0.6176 | likely_pathogenic | 0.6357 | pathogenic | -0.72 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
T/I | 0.818 | likely_pathogenic | 0.8413 | pathogenic | -0.124 | Destabilizing | 0.999 | D | 0.712 | prob.delet. | N | 0.469859576 | None | None | N |
T/K | 0.5856 | likely_pathogenic | 0.6036 | pathogenic | -0.349 | Destabilizing | 0.999 | D | 0.665 | neutral | N | 0.497439021 | None | None | N |
T/L | 0.4424 | ambiguous | 0.472 | ambiguous | -0.124 | Destabilizing | 0.998 | D | 0.584 | neutral | None | None | None | None | N |
T/M | 0.2352 | likely_benign | 0.2516 | benign | 0.054 | Stabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | N |
T/N | 0.1794 | likely_benign | 0.1804 | benign | -0.094 | Destabilizing | 0.999 | D | 0.645 | neutral | None | None | None | None | N |
T/P | 0.6064 | likely_pathogenic | 0.6418 | pathogenic | -0.156 | Destabilizing | 0.999 | D | 0.706 | prob.neutral | N | 0.469099108 | None | None | N |
T/Q | 0.5954 | likely_pathogenic | 0.62 | pathogenic | -0.342 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
T/R | 0.5647 | likely_pathogenic | 0.5856 | pathogenic | -0.068 | Destabilizing | 0.999 | D | 0.697 | prob.neutral | N | 0.514563344 | None | None | N |
T/S | 0.1655 | likely_benign | 0.1649 | benign | -0.291 | Destabilizing | 0.905 | D | 0.329 | neutral | N | 0.455818898 | None | None | N |
T/V | 0.6782 | likely_pathogenic | 0.6982 | pathogenic | -0.156 | Destabilizing | 0.998 | D | 0.518 | neutral | None | None | None | None | N |
T/W | 0.8866 | likely_pathogenic | 0.8975 | pathogenic | -0.848 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
T/Y | 0.7268 | likely_pathogenic | 0.7408 | pathogenic | -0.561 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.