Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31262 | 94009;94010;94011 | chr2:178547842;178547841;178547840 | chr2:179412569;179412568;179412567 |
N2AB | 29621 | 89086;89087;89088 | chr2:178547842;178547841;178547840 | chr2:179412569;179412568;179412567 |
N2A | 28694 | 86305;86306;86307 | chr2:178547842;178547841;178547840 | chr2:179412569;179412568;179412567 |
N2B | 22197 | 66814;66815;66816 | chr2:178547842;178547841;178547840 | chr2:179412569;179412568;179412567 |
Novex-1 | 22322 | 67189;67190;67191 | chr2:178547842;178547841;178547840 | chr2:179412569;179412568;179412567 |
Novex-2 | 22389 | 67390;67391;67392 | chr2:178547842;178547841;178547840 | chr2:179412569;179412568;179412567 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/E | None | None | 0.484 | D | 0.68 | 0.571 | 0.784914850903 | gnomAD-4.0.0 | 3.18217E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71556E-06 | 0 | 0 |
V/G | None | None | 0.317 | N | 0.696 | 0.525 | 0.767050086336 | gnomAD-4.0.0 | 1.59108E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88253E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4661 | ambiguous | 0.4695 | ambiguous | -1.876 | Destabilizing | 0.027 | N | 0.61 | neutral | D | 0.525498854 | None | None | N |
V/C | 0.7057 | likely_pathogenic | 0.7219 | pathogenic | -1.509 | Destabilizing | 0.935 | D | 0.643 | neutral | None | None | None | None | N |
V/D | 0.8616 | likely_pathogenic | 0.8705 | pathogenic | -2.025 | Highly Destabilizing | 0.555 | D | 0.727 | prob.delet. | None | None | None | None | N |
V/E | 0.7306 | likely_pathogenic | 0.7434 | pathogenic | -1.974 | Destabilizing | 0.484 | N | 0.68 | prob.neutral | D | 0.525312016 | None | None | N |
V/F | 0.2128 | likely_benign | 0.2022 | benign | -1.389 | Destabilizing | 0.001 | N | 0.467 | neutral | None | None | None | None | N |
V/G | 0.509 | ambiguous | 0.538 | ambiguous | -2.256 | Highly Destabilizing | 0.317 | N | 0.696 | prob.neutral | N | 0.513195242 | None | None | N |
V/H | 0.794 | likely_pathogenic | 0.7979 | pathogenic | -1.809 | Destabilizing | 0.935 | D | 0.689 | prob.neutral | None | None | None | None | N |
V/I | 0.0761 | likely_benign | 0.0766 | benign | -0.897 | Destabilizing | 0.002 | N | 0.345 | neutral | None | None | None | None | N |
V/K | 0.718 | likely_pathogenic | 0.7254 | pathogenic | -1.6 | Destabilizing | 0.38 | N | 0.665 | neutral | None | None | None | None | N |
V/L | 0.1937 | likely_benign | 0.2128 | benign | -0.897 | Destabilizing | None | N | 0.193 | neutral | D | 0.527170935 | None | None | N |
V/M | 0.1454 | likely_benign | 0.1661 | benign | -0.798 | Destabilizing | 0.004 | N | 0.416 | neutral | N | 0.490318047 | None | None | N |
V/N | 0.6712 | likely_pathogenic | 0.6841 | pathogenic | -1.516 | Destabilizing | 0.555 | D | 0.719 | prob.delet. | None | None | None | None | N |
V/P | 0.9722 | likely_pathogenic | 0.9754 | pathogenic | -1.191 | Destabilizing | 0.791 | D | 0.688 | prob.neutral | None | None | None | None | N |
V/Q | 0.6223 | likely_pathogenic | 0.6443 | pathogenic | -1.642 | Destabilizing | 0.38 | N | 0.675 | prob.neutral | None | None | None | None | N |
V/R | 0.6538 | likely_pathogenic | 0.6506 | pathogenic | -1.113 | Destabilizing | 0.38 | N | 0.73 | prob.delet. | None | None | None | None | N |
V/S | 0.5575 | ambiguous | 0.5628 | ambiguous | -2.087 | Highly Destabilizing | 0.38 | N | 0.672 | neutral | None | None | None | None | N |
V/T | 0.3982 | ambiguous | 0.3904 | ambiguous | -1.92 | Destabilizing | 0.149 | N | 0.643 | neutral | None | None | None | None | N |
V/W | 0.8378 | likely_pathogenic | 0.8493 | pathogenic | -1.639 | Destabilizing | 0.935 | D | 0.701 | prob.neutral | None | None | None | None | N |
V/Y | 0.6076 | likely_pathogenic | 0.5992 | pathogenic | -1.349 | Destabilizing | 0.235 | N | 0.688 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.