Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31274 | 94045;94046;94047 | chr2:178547806;178547805;178547804 | chr2:179412533;179412532;179412531 |
N2AB | 29633 | 89122;89123;89124 | chr2:178547806;178547805;178547804 | chr2:179412533;179412532;179412531 |
N2A | 28706 | 86341;86342;86343 | chr2:178547806;178547805;178547804 | chr2:179412533;179412532;179412531 |
N2B | 22209 | 66850;66851;66852 | chr2:178547806;178547805;178547804 | chr2:179412533;179412532;179412531 |
Novex-1 | 22334 | 67225;67226;67227 | chr2:178547806;178547805;178547804 | chr2:179412533;179412532;179412531 |
Novex-2 | 22401 | 67426;67427;67428 | chr2:178547806;178547805;178547804 | chr2:179412533;179412532;179412531 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/N | None | None | 0.062 | D | 0.505 | 0.173 | 0.329282125956 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.074 | likely_benign | 0.0771 | benign | -1.185 | Destabilizing | 0.027 | N | 0.395 | neutral | N | 0.487533343 | None | None | N |
T/C | 0.2268 | likely_benign | 0.2293 | benign | -0.87 | Destabilizing | 0.824 | D | 0.531 | neutral | None | None | None | None | N |
T/D | 0.3754 | ambiguous | 0.3846 | ambiguous | -0.813 | Destabilizing | 0.081 | N | 0.517 | neutral | None | None | None | None | N |
T/E | 0.283 | likely_benign | 0.2779 | benign | -0.69 | Destabilizing | 0.081 | N | 0.505 | neutral | None | None | None | None | N |
T/F | 0.1644 | likely_benign | 0.1636 | benign | -1.023 | Destabilizing | 0.38 | N | 0.573 | neutral | None | None | None | None | N |
T/G | 0.2154 | likely_benign | 0.2262 | benign | -1.538 | Destabilizing | 0.081 | N | 0.546 | neutral | None | None | None | None | N |
T/H | 0.158 | likely_benign | 0.1627 | benign | -1.687 | Destabilizing | 0.824 | D | 0.567 | neutral | None | None | None | None | N |
T/I | 0.0939 | likely_benign | 0.1004 | benign | -0.29 | Destabilizing | 0.027 | N | 0.543 | neutral | N | 0.447462144 | None | None | N |
T/K | 0.1794 | likely_benign | 0.1777 | benign | -0.553 | Destabilizing | 0.081 | N | 0.51 | neutral | None | None | None | None | N |
T/L | 0.0718 | likely_benign | 0.0708 | benign | -0.29 | Destabilizing | None | N | 0.305 | neutral | None | None | None | None | N |
T/M | 0.07 | likely_benign | 0.074 | benign | -0.188 | Destabilizing | 0.38 | N | 0.553 | neutral | None | None | None | None | N |
T/N | 0.112 | likely_benign | 0.1195 | benign | -0.915 | Destabilizing | 0.062 | N | 0.505 | neutral | D | 0.523288055 | None | None | N |
T/P | 0.7017 | likely_pathogenic | 0.7154 | pathogenic | -0.557 | Destabilizing | 0.317 | N | 0.543 | neutral | N | 0.48905428 | None | None | N |
T/Q | 0.1711 | likely_benign | 0.1814 | benign | -0.898 | Destabilizing | 0.38 | N | 0.548 | neutral | None | None | None | None | N |
T/R | 0.1402 | likely_benign | 0.1385 | benign | -0.579 | Destabilizing | 0.38 | N | 0.541 | neutral | None | None | None | None | N |
T/S | 0.0873 | likely_benign | 0.09 | benign | -1.242 | Destabilizing | None | N | 0.219 | neutral | N | 0.445827349 | None | None | N |
T/V | 0.0895 | likely_benign | 0.0921 | benign | -0.557 | Destabilizing | 0.002 | N | 0.227 | neutral | None | None | None | None | N |
T/W | 0.4095 | ambiguous | 0.4099 | ambiguous | -0.997 | Destabilizing | 0.935 | D | 0.589 | neutral | None | None | None | None | N |
T/Y | 0.1938 | likely_benign | 0.188 | benign | -0.689 | Destabilizing | 0.555 | D | 0.565 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.