Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31283 | 94072;94073;94074 | chr2:178547779;178547778;178547777 | chr2:179412506;179412505;179412504 |
N2AB | 29642 | 89149;89150;89151 | chr2:178547779;178547778;178547777 | chr2:179412506;179412505;179412504 |
N2A | 28715 | 86368;86369;86370 | chr2:178547779;178547778;178547777 | chr2:179412506;179412505;179412504 |
N2B | 22218 | 66877;66878;66879 | chr2:178547779;178547778;178547777 | chr2:179412506;179412505;179412504 |
Novex-1 | 22343 | 67252;67253;67254 | chr2:178547779;178547778;178547777 | chr2:179412506;179412505;179412504 |
Novex-2 | 22410 | 67453;67454;67455 | chr2:178547779;178547778;178547777 | chr2:179412506;179412505;179412504 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/Y | None | None | 0.999 | N | 0.812 | 0.548 | 0.785898684871 | gnomAD-4.0.0 | 1.59103E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85773E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1241 | likely_benign | 0.1353 | benign | -0.747 | Destabilizing | 0.973 | D | 0.391 | neutral | N | 0.497176102 | None | None | N |
S/C | 0.1836 | likely_benign | 0.2216 | benign | -0.501 | Destabilizing | 1.0 | D | 0.745 | deleterious | D | 0.534871122 | None | None | N |
S/D | 0.7769 | likely_pathogenic | 0.8051 | pathogenic | 0.193 | Stabilizing | 0.996 | D | 0.501 | neutral | None | None | None | None | N |
S/E | 0.8114 | likely_pathogenic | 0.8415 | pathogenic | 0.183 | Stabilizing | 0.996 | D | 0.498 | neutral | None | None | None | None | N |
S/F | 0.6511 | likely_pathogenic | 0.7294 | pathogenic | -0.991 | Destabilizing | 0.999 | D | 0.819 | deleterious | D | 0.523261327 | None | None | N |
S/G | 0.0998 | likely_benign | 0.1142 | benign | -0.975 | Destabilizing | 0.996 | D | 0.461 | neutral | None | None | None | None | N |
S/H | 0.686 | likely_pathogenic | 0.7295 | pathogenic | -1.377 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
S/I | 0.5732 | likely_pathogenic | 0.6529 | pathogenic | -0.249 | Destabilizing | 0.998 | D | 0.786 | deleterious | None | None | None | None | N |
S/K | 0.9098 | likely_pathogenic | 0.9247 | pathogenic | -0.488 | Destabilizing | 0.996 | D | 0.496 | neutral | None | None | None | None | N |
S/L | 0.3356 | likely_benign | 0.3975 | ambiguous | -0.249 | Destabilizing | 0.992 | D | 0.622 | neutral | None | None | None | None | N |
S/M | 0.4407 | ambiguous | 0.4875 | ambiguous | -0.027 | Destabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | N |
S/N | 0.3711 | ambiguous | 0.4152 | ambiguous | -0.426 | Destabilizing | 0.996 | D | 0.495 | neutral | None | None | None | None | N |
S/P | 0.9306 | likely_pathogenic | 0.9655 | pathogenic | -0.382 | Destabilizing | 0.999 | D | 0.751 | deleterious | D | 0.534364143 | None | None | N |
S/Q | 0.7595 | likely_pathogenic | 0.7947 | pathogenic | -0.58 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | N |
S/R | 0.8308 | likely_pathogenic | 0.8649 | pathogenic | -0.399 | Destabilizing | 0.999 | D | 0.765 | deleterious | None | None | None | None | N |
S/T | 0.1355 | likely_benign | 0.1451 | benign | -0.528 | Destabilizing | 0.543 | D | 0.365 | neutral | N | 0.518764882 | None | None | N |
S/V | 0.5364 | ambiguous | 0.6099 | pathogenic | -0.382 | Destabilizing | 0.998 | D | 0.705 | prob.neutral | None | None | None | None | N |
S/W | 0.7727 | likely_pathogenic | 0.8493 | pathogenic | -0.921 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
S/Y | 0.5839 | likely_pathogenic | 0.6641 | pathogenic | -0.657 | Destabilizing | 0.999 | D | 0.812 | deleterious | N | 0.516513378 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.