Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31287 | 94084;94085;94086 | chr2:178547767;178547766;178547765 | chr2:179412494;179412493;179412492 |
N2AB | 29646 | 89161;89162;89163 | chr2:178547767;178547766;178547765 | chr2:179412494;179412493;179412492 |
N2A | 28719 | 86380;86381;86382 | chr2:178547767;178547766;178547765 | chr2:179412494;179412493;179412492 |
N2B | 22222 | 66889;66890;66891 | chr2:178547767;178547766;178547765 | chr2:179412494;179412493;179412492 |
Novex-1 | 22347 | 67264;67265;67266 | chr2:178547767;178547766;178547765 | chr2:179412494;179412493;179412492 |
Novex-2 | 22414 | 67465;67466;67467 | chr2:178547767;178547766;178547765 | chr2:179412494;179412493;179412492 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/S | rs374887049 | -2.174 | 0.324 | N | 0.559 | 0.219 | None | gnomAD-2.1.1 | 2.5E-05 | None | None | None | None | N | None | 2.89376E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
F/S | rs374887049 | -2.174 | 0.324 | N | 0.559 | 0.219 | None | gnomAD-3.1.2 | 5.26E-05 | None | None | None | None | N | None | 1.93069E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
F/S | rs374887049 | -2.174 | 0.324 | N | 0.559 | 0.219 | None | gnomAD-4.0.0 | 1.05343E-05 | None | None | None | None | N | None | 2.26957E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.4164 | ambiguous | 0.4258 | ambiguous | -2.816 | Highly Destabilizing | 0.388 | N | 0.551 | neutral | None | None | None | None | N |
F/C | 0.2204 | likely_benign | 0.2082 | benign | -1.885 | Destabilizing | 0.975 | D | 0.576 | neutral | N | 0.371995154 | None | None | N |
F/D | 0.533 | ambiguous | 0.5237 | ambiguous | -2.285 | Highly Destabilizing | 0.69 | D | 0.603 | neutral | None | None | None | None | N |
F/E | 0.597 | likely_pathogenic | 0.6017 | pathogenic | -2.198 | Highly Destabilizing | 0.388 | N | 0.597 | neutral | None | None | None | None | N |
F/G | 0.6279 | likely_pathogenic | 0.6363 | pathogenic | -3.144 | Highly Destabilizing | 0.388 | N | 0.575 | neutral | None | None | None | None | N |
F/H | 0.3028 | likely_benign | 0.2712 | benign | -1.332 | Destabilizing | 0.002 | N | 0.354 | neutral | None | None | None | None | N |
F/I | 0.1541 | likely_benign | 0.1534 | benign | -1.799 | Destabilizing | 0.324 | N | 0.489 | neutral | N | 0.33684243 | None | None | N |
F/K | 0.6992 | likely_pathogenic | 0.6826 | pathogenic | -1.568 | Destabilizing | 0.69 | D | 0.599 | neutral | None | None | None | None | N |
F/L | 0.6567 | likely_pathogenic | 0.6476 | pathogenic | -1.799 | Destabilizing | 0.09 | N | 0.53 | neutral | N | 0.374283311 | None | None | N |
F/M | 0.3943 | ambiguous | 0.3975 | ambiguous | -1.634 | Destabilizing | 0.932 | D | 0.494 | neutral | None | None | None | None | N |
F/N | 0.3734 | ambiguous | 0.3453 | ambiguous | -1.608 | Destabilizing | 0.527 | D | 0.602 | neutral | None | None | None | None | N |
F/P | 0.9801 | likely_pathogenic | 0.983 | pathogenic | -2.138 | Highly Destabilizing | 0.932 | D | 0.616 | neutral | None | None | None | None | N |
F/Q | 0.5023 | ambiguous | 0.5016 | ambiguous | -1.834 | Destabilizing | 0.69 | D | 0.615 | neutral | None | None | None | None | N |
F/R | 0.556 | ambiguous | 0.5422 | ambiguous | -0.763 | Destabilizing | 0.69 | D | 0.618 | neutral | None | None | None | None | N |
F/S | 0.2385 | likely_benign | 0.2333 | benign | -2.401 | Highly Destabilizing | 0.324 | N | 0.559 | neutral | N | 0.324201207 | None | None | N |
F/T | 0.2947 | likely_benign | 0.2912 | benign | -2.221 | Highly Destabilizing | 0.818 | D | 0.571 | neutral | None | None | None | None | N |
F/V | 0.1567 | likely_benign | 0.1607 | benign | -2.138 | Highly Destabilizing | 0.324 | N | 0.495 | neutral | N | 0.344480479 | None | None | N |
F/W | 0.4215 | ambiguous | 0.4093 | ambiguous | -0.712 | Destabilizing | 0.818 | D | 0.503 | neutral | None | None | None | None | N |
F/Y | 0.0915 | likely_benign | 0.0775 | benign | -0.947 | Destabilizing | None | N | 0.172 | neutral | N | 0.389714123 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.