Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31289 | 94090;94091;94092 | chr2:178547761;178547760;178547759 | chr2:179412488;179412487;179412486 |
N2AB | 29648 | 89167;89168;89169 | chr2:178547761;178547760;178547759 | chr2:179412488;179412487;179412486 |
N2A | 28721 | 86386;86387;86388 | chr2:178547761;178547760;178547759 | chr2:179412488;179412487;179412486 |
N2B | 22224 | 66895;66896;66897 | chr2:178547761;178547760;178547759 | chr2:179412488;179412487;179412486 |
Novex-1 | 22349 | 67270;67271;67272 | chr2:178547761;178547760;178547759 | chr2:179412488;179412487;179412486 |
Novex-2 | 22416 | 67471;67472;67473 | chr2:178547761;178547760;178547759 | chr2:179412488;179412487;179412486 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.978 | N | 0.75 | 0.319 | 0.451504584351 | gnomAD-4.0.0 | 6.84167E-07 | None | None | None | None | N | None | 2.98793E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/N | rs371666313 | -1.335 | 0.997 | D | 0.727 | 0.347 | None | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
T/N | rs371666313 | -1.335 | 0.997 | D | 0.727 | 0.347 | None | gnomAD-4.0.0 | 1.85897E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.54267E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1352 | likely_benign | 0.1464 | benign | -1.17 | Destabilizing | 0.948 | D | 0.635 | neutral | N | 0.488365809 | None | None | N |
T/C | 0.4339 | ambiguous | 0.4339 | ambiguous | -0.861 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
T/D | 0.6075 | likely_pathogenic | 0.6633 | pathogenic | -1.127 | Destabilizing | 0.998 | D | 0.775 | deleterious | None | None | None | None | N |
T/E | 0.4139 | ambiguous | 0.4472 | ambiguous | -0.954 | Destabilizing | 0.998 | D | 0.777 | deleterious | None | None | None | None | N |
T/F | 0.3022 | likely_benign | 0.3191 | benign | -0.803 | Destabilizing | 0.999 | D | 0.812 | deleterious | None | None | None | None | N |
T/G | 0.4274 | ambiguous | 0.4712 | ambiguous | -1.575 | Destabilizing | 0.992 | D | 0.757 | deleterious | None | None | None | None | N |
T/H | 0.2679 | likely_benign | 0.2813 | benign | -1.661 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | N |
T/I | 0.1435 | likely_benign | 0.1613 | benign | -0.117 | Destabilizing | 0.978 | D | 0.75 | deleterious | N | 0.498946971 | None | None | N |
T/K | 0.3106 | likely_benign | 0.3301 | benign | -0.644 | Destabilizing | 0.998 | D | 0.773 | deleterious | None | None | None | None | N |
T/L | 0.1044 | likely_benign | 0.115 | benign | -0.117 | Destabilizing | 0.983 | D | 0.682 | prob.neutral | None | None | None | None | N |
T/M | 0.0936 | likely_benign | 0.0926 | benign | -0.111 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
T/N | 0.1867 | likely_benign | 0.202 | benign | -1.189 | Destabilizing | 0.997 | D | 0.727 | prob.delet. | D | 0.536483851 | None | None | N |
T/P | 0.679 | likely_pathogenic | 0.7493 | pathogenic | -0.436 | Destabilizing | 0.999 | D | 0.799 | deleterious | N | 0.516384792 | None | None | N |
T/Q | 0.2552 | likely_benign | 0.2658 | benign | -1.025 | Destabilizing | 0.999 | D | 0.795 | deleterious | None | None | None | None | N |
T/R | 0.2599 | likely_benign | 0.2723 | benign | -0.782 | Destabilizing | 0.999 | D | 0.8 | deleterious | None | None | None | None | N |
T/S | 0.1498 | likely_benign | 0.1559 | benign | -1.466 | Destabilizing | 0.775 | D | 0.413 | neutral | N | 0.505064866 | None | None | N |
T/V | 0.1356 | likely_benign | 0.143 | benign | -0.436 | Destabilizing | 0.611 | D | 0.431 | neutral | None | None | None | None | N |
T/W | 0.6626 | likely_pathogenic | 0.703 | pathogenic | -0.873 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
T/Y | 0.3287 | likely_benign | 0.3469 | ambiguous | -0.537 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.