Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31319 | 94180;94181;94182 | chr2:178547671;178547670;178547669 | chr2:179412398;179412397;179412396 |
N2AB | 29678 | 89257;89258;89259 | chr2:178547671;178547670;178547669 | chr2:179412398;179412397;179412396 |
N2A | 28751 | 86476;86477;86478 | chr2:178547671;178547670;178547669 | chr2:179412398;179412397;179412396 |
N2B | 22254 | 66985;66986;66987 | chr2:178547671;178547670;178547669 | chr2:179412398;179412397;179412396 |
Novex-1 | 22379 | 67360;67361;67362 | chr2:178547671;178547670;178547669 | chr2:179412398;179412397;179412396 |
Novex-2 | 22446 | 67561;67562;67563 | chr2:178547671;178547670;178547669 | chr2:179412398;179412397;179412396 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | None | None | 0.999 | N | 0.748 | 0.455 | 0.414930877219 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0882 | likely_benign | 0.0912 | benign | -0.428 | Destabilizing | 0.973 | D | 0.315 | neutral | N | 0.514558636 | None | None | N |
S/C | 0.1357 | likely_benign | 0.1397 | benign | -0.351 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | N |
S/D | 0.3462 | ambiguous | 0.3591 | ambiguous | 0.313 | Stabilizing | 0.996 | D | 0.533 | neutral | None | None | None | None | N |
S/E | 0.4484 | ambiguous | 0.4656 | ambiguous | 0.224 | Stabilizing | 0.999 | D | 0.541 | neutral | None | None | None | None | N |
S/F | 0.1658 | likely_benign | 0.186 | benign | -0.97 | Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | N |
S/G | 0.12 | likely_benign | 0.1058 | benign | -0.547 | Destabilizing | 0.134 | N | 0.183 | neutral | None | None | None | None | N |
S/H | 0.3063 | likely_benign | 0.3082 | benign | -1.044 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
S/I | 0.1816 | likely_benign | 0.1935 | benign | -0.245 | Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | N |
S/K | 0.5585 | ambiguous | 0.5972 | pathogenic | -0.465 | Destabilizing | 0.996 | D | 0.56 | neutral | None | None | None | None | N |
S/L | 0.1009 | likely_benign | 0.1156 | benign | -0.245 | Destabilizing | 0.999 | D | 0.66 | neutral | N | 0.468055555 | None | None | N |
S/M | 0.1873 | likely_benign | 0.1906 | benign | -0.023 | Destabilizing | 1.0 | D | 0.688 | prob.neutral | None | None | None | None | N |
S/N | 0.1562 | likely_benign | 0.1545 | benign | -0.223 | Destabilizing | 0.996 | D | 0.534 | neutral | None | None | None | None | N |
S/P | 0.8705 | likely_pathogenic | 0.8478 | pathogenic | -0.277 | Destabilizing | 0.999 | D | 0.748 | deleterious | N | 0.488288633 | None | None | N |
S/Q | 0.4244 | ambiguous | 0.4315 | ambiguous | -0.463 | Destabilizing | 1.0 | D | 0.629 | neutral | None | None | None | None | N |
S/R | 0.5293 | ambiguous | 0.5699 | pathogenic | -0.292 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
S/T | 0.0693 | likely_benign | 0.0698 | benign | -0.357 | Destabilizing | 0.994 | D | 0.433 | neutral | N | 0.435633706 | None | None | N |
S/V | 0.1708 | likely_benign | 0.176 | benign | -0.277 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
S/W | 0.3998 | ambiguous | 0.4367 | ambiguous | -0.95 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
S/Y | 0.1914 | likely_benign | 0.2112 | benign | -0.68 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.