Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31342 | 94249;94250;94251 | chr2:178547602;178547601;178547600 | chr2:179412329;179412328;179412327 |
N2AB | 29701 | 89326;89327;89328 | chr2:178547602;178547601;178547600 | chr2:179412329;179412328;179412327 |
N2A | 28774 | 86545;86546;86547 | chr2:178547602;178547601;178547600 | chr2:179412329;179412328;179412327 |
N2B | 22277 | 67054;67055;67056 | chr2:178547602;178547601;178547600 | chr2:179412329;179412328;179412327 |
Novex-1 | 22402 | 67429;67430;67431 | chr2:178547602;178547601;178547600 | chr2:179412329;179412328;179412327 |
Novex-2 | 22469 | 67630;67631;67632 | chr2:178547602;178547601;178547600 | chr2:179412329;179412328;179412327 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1697759975 | None | 0.971 | N | 0.778 | 0.405 | 0.48763082235 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/I | rs1697759975 | None | 0.971 | N | 0.778 | 0.405 | 0.48763082235 | gnomAD-4.0.0 | 6.81647E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.32342E-06 | 0 | 0 |
T/S | None | None | 0.058 | N | 0.181 | 0.19 | 0.180583059064 | gnomAD-4.0.0 | 6.84182E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99447E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2432 | likely_benign | 0.172 | benign | -0.69 | Destabilizing | 0.489 | N | 0.474 | neutral | N | 0.494578829 | None | None | I |
T/C | 0.7468 | likely_pathogenic | 0.589 | pathogenic | -0.433 | Destabilizing | 0.998 | D | 0.728 | prob.delet. | None | None | None | None | I |
T/D | 0.831 | likely_pathogenic | 0.7263 | pathogenic | -0.46 | Destabilizing | 0.956 | D | 0.698 | prob.neutral | None | None | None | None | I |
T/E | 0.794 | likely_pathogenic | 0.6957 | pathogenic | -0.504 | Destabilizing | 0.956 | D | 0.703 | prob.neutral | None | None | None | None | I |
T/F | 0.7476 | likely_pathogenic | 0.5866 | pathogenic | -0.947 | Destabilizing | 0.978 | D | 0.798 | deleterious | None | None | None | None | I |
T/G | 0.5039 | ambiguous | 0.3401 | ambiguous | -0.891 | Destabilizing | 0.754 | D | 0.607 | neutral | None | None | None | None | I |
T/H | 0.6752 | likely_pathogenic | 0.5222 | ambiguous | -1.231 | Destabilizing | 0.994 | D | 0.764 | deleterious | None | None | None | None | I |
T/I | 0.5956 | likely_pathogenic | 0.4638 | ambiguous | -0.259 | Destabilizing | 0.971 | D | 0.778 | deleterious | N | 0.491932493 | None | None | I |
T/K | 0.7127 | likely_pathogenic | 0.6177 | pathogenic | -0.754 | Destabilizing | 0.915 | D | 0.703 | prob.neutral | None | None | None | None | I |
T/L | 0.2776 | likely_benign | 0.1991 | benign | -0.259 | Destabilizing | 0.86 | D | 0.628 | neutral | None | None | None | None | I |
T/M | 0.21 | likely_benign | 0.1633 | benign | 0.162 | Stabilizing | 0.998 | D | 0.729 | prob.delet. | None | None | None | None | I |
T/N | 0.3039 | likely_benign | 0.2114 | benign | -0.615 | Destabilizing | 0.89 | D | 0.671 | neutral | D | 0.523178119 | None | None | I |
T/P | 0.7136 | likely_pathogenic | 0.6326 | pathogenic | -0.372 | Destabilizing | 0.971 | D | 0.778 | deleterious | D | 0.525813816 | None | None | I |
T/Q | 0.589 | likely_pathogenic | 0.4742 | ambiguous | -0.904 | Destabilizing | 0.956 | D | 0.771 | deleterious | None | None | None | None | I |
T/R | 0.6513 | likely_pathogenic | 0.5411 | ambiguous | -0.403 | Destabilizing | 0.956 | D | 0.785 | deleterious | None | None | None | None | I |
T/S | 0.1897 | likely_benign | 0.1246 | benign | -0.828 | Destabilizing | 0.058 | N | 0.181 | neutral | N | 0.515673357 | None | None | I |
T/V | 0.4597 | ambiguous | 0.3481 | ambiguous | -0.372 | Destabilizing | 0.86 | D | 0.587 | neutral | None | None | None | None | I |
T/W | 0.9188 | likely_pathogenic | 0.8399 | pathogenic | -0.875 | Destabilizing | 0.998 | D | 0.791 | deleterious | None | None | None | None | I |
T/Y | 0.7718 | likely_pathogenic | 0.6185 | pathogenic | -0.644 | Destabilizing | 0.993 | D | 0.79 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.