Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31353 | 94282;94283;94284 | chr2:178547569;178547568;178547567 | chr2:179412296;179412295;179412294 |
N2AB | 29712 | 89359;89360;89361 | chr2:178547569;178547568;178547567 | chr2:179412296;179412295;179412294 |
N2A | 28785 | 86578;86579;86580 | chr2:178547569;178547568;178547567 | chr2:179412296;179412295;179412294 |
N2B | 22288 | 67087;67088;67089 | chr2:178547569;178547568;178547567 | chr2:179412296;179412295;179412294 |
Novex-1 | 22413 | 67462;67463;67464 | chr2:178547569;178547568;178547567 | chr2:179412296;179412295;179412294 |
Novex-2 | 22480 | 67663;67664;67665 | chr2:178547569;178547568;178547567 | chr2:179412296;179412295;179412294 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.027 | N | 0.32 | 0.083 | 0.203808441222 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1089 | likely_benign | 0.1006 | benign | -0.401 | Destabilizing | 0.027 | N | 0.32 | neutral | N | 0.461761514 | None | None | N |
T/C | 0.4537 | ambiguous | 0.4116 | ambiguous | -0.183 | Destabilizing | 0.935 | D | 0.362 | neutral | None | None | None | None | N |
T/D | 0.5267 | ambiguous | 0.4669 | ambiguous | 0.074 | Stabilizing | 0.149 | N | 0.321 | neutral | None | None | None | None | N |
T/E | 0.4721 | ambiguous | 0.4286 | ambiguous | -0.021 | Destabilizing | 0.081 | N | 0.286 | neutral | None | None | None | None | N |
T/F | 0.4336 | ambiguous | 0.398 | ambiguous | -0.983 | Destabilizing | 0.791 | D | 0.435 | neutral | None | None | None | None | N |
T/G | 0.2215 | likely_benign | 0.1902 | benign | -0.492 | Destabilizing | 0.149 | N | 0.313 | neutral | None | None | None | None | N |
T/H | 0.3298 | likely_benign | 0.2763 | benign | -0.839 | Destabilizing | 0.824 | D | 0.435 | neutral | None | None | None | None | N |
T/I | 0.4522 | ambiguous | 0.4055 | ambiguous | -0.279 | Destabilizing | 0.484 | N | 0.331 | neutral | N | 0.468459177 | None | None | N |
T/K | 0.2807 | likely_benign | 0.2347 | benign | -0.292 | Destabilizing | None | N | 0.279 | neutral | N | 0.420048178 | None | None | N |
T/L | 0.1611 | likely_benign | 0.1499 | benign | -0.279 | Destabilizing | 0.149 | N | 0.283 | neutral | None | None | None | None | N |
T/M | 0.1183 | likely_benign | 0.12 | benign | 0.038 | Stabilizing | 0.935 | D | 0.339 | neutral | None | None | None | None | N |
T/N | 0.134 | likely_benign | 0.1231 | benign | -0.005 | Destabilizing | 0.149 | N | 0.284 | neutral | None | None | None | None | N |
T/P | 0.5108 | ambiguous | 0.4738 | ambiguous | -0.294 | Destabilizing | 0.484 | N | 0.331 | neutral | N | 0.486774602 | None | None | N |
T/Q | 0.2658 | likely_benign | 0.2255 | benign | -0.308 | Destabilizing | 0.235 | N | 0.331 | neutral | None | None | None | None | N |
T/R | 0.2603 | likely_benign | 0.2212 | benign | -0.011 | Destabilizing | 0.062 | N | 0.32 | neutral | N | 0.416143868 | None | None | N |
T/S | 0.0934 | likely_benign | 0.0864 | benign | -0.214 | Destabilizing | 0.002 | N | 0.178 | neutral | N | 0.383530017 | None | None | N |
T/V | 0.2928 | likely_benign | 0.2596 | benign | -0.294 | Destabilizing | 0.149 | N | 0.258 | neutral | None | None | None | None | N |
T/W | 0.7493 | likely_pathogenic | 0.7167 | pathogenic | -0.967 | Destabilizing | 0.935 | D | 0.527 | neutral | None | None | None | None | N |
T/Y | 0.4601 | ambiguous | 0.3896 | ambiguous | -0.685 | Destabilizing | 0.791 | D | 0.437 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.