Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31367 | 94324;94325;94326 | chr2:178547527;178547526;178547525 | chr2:179412254;179412253;179412252 |
N2AB | 29726 | 89401;89402;89403 | chr2:178547527;178547526;178547525 | chr2:179412254;179412253;179412252 |
N2A | 28799 | 86620;86621;86622 | chr2:178547527;178547526;178547525 | chr2:179412254;179412253;179412252 |
N2B | 22302 | 67129;67130;67131 | chr2:178547527;178547526;178547525 | chr2:179412254;179412253;179412252 |
Novex-1 | 22427 | 67504;67505;67506 | chr2:178547527;178547526;178547525 | chr2:179412254;179412253;179412252 |
Novex-2 | 22494 | 67705;67706;67707 | chr2:178547527;178547526;178547525 | chr2:179412254;179412253;179412252 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | None | None | 0.996 | N | 0.469 | 0.201 | 0.204665344411 | gnomAD-4.0.0 | 6.84259E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99489E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2421 | likely_benign | 0.228 | benign | -0.638 | Destabilizing | 0.863 | D | 0.44 | neutral | None | None | None | None | N |
Q/C | 0.5852 | likely_pathogenic | 0.5625 | ambiguous | -0.06 | Destabilizing | 0.999 | D | 0.585 | neutral | None | None | None | None | N |
Q/D | 0.5242 | ambiguous | 0.4727 | ambiguous | -0.043 | Destabilizing | 0.969 | D | 0.345 | neutral | None | None | None | None | N |
Q/E | 0.0947 | likely_benign | 0.0949 | benign | 0.061 | Stabilizing | 0.906 | D | 0.403 | neutral | N | 0.427782227 | None | None | N |
Q/F | 0.7295 | likely_pathogenic | 0.713 | pathogenic | -0.306 | Destabilizing | 0.997 | D | 0.595 | neutral | None | None | None | None | N |
Q/G | 0.3837 | ambiguous | 0.354 | ambiguous | -0.982 | Destabilizing | 0.969 | D | 0.474 | neutral | None | None | None | None | N |
Q/H | 0.2072 | likely_benign | 0.196 | benign | -0.574 | Destabilizing | 0.996 | D | 0.469 | neutral | N | 0.439308729 | None | None | N |
Q/I | 0.4179 | ambiguous | 0.4263 | ambiguous | 0.238 | Stabilizing | 0.982 | D | 0.582 | neutral | None | None | None | None | N |
Q/K | 0.1308 | likely_benign | 0.1319 | benign | -0.167 | Destabilizing | 0.826 | D | 0.371 | neutral | N | 0.400462339 | None | None | N |
Q/L | 0.1847 | likely_benign | 0.1842 | benign | 0.238 | Stabilizing | 0.92 | D | 0.47 | neutral | N | 0.477827045 | None | None | N |
Q/M | 0.3166 | likely_benign | 0.3244 | benign | 0.432 | Stabilizing | 0.997 | D | 0.467 | neutral | None | None | None | None | N |
Q/N | 0.3118 | likely_benign | 0.2812 | benign | -0.724 | Destabilizing | 0.969 | D | 0.313 | neutral | None | None | None | None | N |
Q/P | 0.8771 | likely_pathogenic | 0.8337 | pathogenic | -0.023 | Destabilizing | 0.986 | D | 0.506 | neutral | N | 0.492641782 | None | None | N |
Q/R | 0.14 | likely_benign | 0.135 | benign | -0.079 | Destabilizing | 0.959 | D | 0.319 | neutral | N | 0.431745252 | None | None | N |
Q/S | 0.226 | likely_benign | 0.2034 | benign | -0.883 | Destabilizing | 0.759 | D | 0.385 | neutral | None | None | None | None | N |
Q/T | 0.1364 | likely_benign | 0.1396 | benign | -0.578 | Destabilizing | 0.079 | N | 0.297 | neutral | None | None | None | None | N |
Q/V | 0.2461 | likely_benign | 0.242 | benign | -0.023 | Destabilizing | 0.939 | D | 0.468 | neutral | None | None | None | None | N |
Q/W | 0.6452 | likely_pathogenic | 0.625 | pathogenic | -0.158 | Destabilizing | 0.999 | D | 0.587 | neutral | None | None | None | None | N |
Q/Y | 0.4895 | ambiguous | 0.4753 | ambiguous | 0.057 | Stabilizing | 0.997 | D | 0.554 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.