Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31371 | 94336;94337;94338 | chr2:178547515;178547514;178547513 | chr2:179412242;179412241;179412240 |
N2AB | 29730 | 89413;89414;89415 | chr2:178547515;178547514;178547513 | chr2:179412242;179412241;179412240 |
N2A | 28803 | 86632;86633;86634 | chr2:178547515;178547514;178547513 | chr2:179412242;179412241;179412240 |
N2B | 22306 | 67141;67142;67143 | chr2:178547515;178547514;178547513 | chr2:179412242;179412241;179412240 |
Novex-1 | 22431 | 67516;67517;67518 | chr2:178547515;178547514;178547513 | chr2:179412242;179412241;179412240 |
Novex-2 | 22498 | 67717;67718;67719 | chr2:178547515;178547514;178547513 | chr2:179412242;179412241;179412240 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs767255232 | 0.116 | 0.964 | N | 0.656 | 0.344 | 0.519889284407 | gnomAD-4.0.0 | 5.47441E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.19603E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1479 | likely_benign | 0.1317 | benign | -0.603 | Destabilizing | 0.76 | D | 0.483 | neutral | D | 0.524178197 | None | None | N |
T/C | 0.5074 | ambiguous | 0.4728 | ambiguous | -0.342 | Destabilizing | 0.999 | D | 0.691 | prob.neutral | None | None | None | None | N |
T/D | 0.7639 | likely_pathogenic | 0.7448 | pathogenic | 0.121 | Stabilizing | 0.986 | D | 0.656 | neutral | None | None | None | None | N |
T/E | 0.7444 | likely_pathogenic | 0.7358 | pathogenic | 0.097 | Stabilizing | 0.986 | D | 0.651 | neutral | None | None | None | None | N |
T/F | 0.4945 | ambiguous | 0.468 | ambiguous | -0.764 | Destabilizing | 0.986 | D | 0.743 | deleterious | None | None | None | None | N |
T/G | 0.2843 | likely_benign | 0.2616 | benign | -0.826 | Destabilizing | 0.91 | D | 0.618 | neutral | None | None | None | None | N |
T/H | 0.5033 | ambiguous | 0.445 | ambiguous | -1.02 | Destabilizing | 0.999 | D | 0.723 | prob.delet. | None | None | None | None | N |
T/I | 0.3615 | ambiguous | 0.3534 | ambiguous | -0.112 | Destabilizing | 0.964 | D | 0.656 | neutral | N | 0.474285755 | None | None | N |
T/K | 0.5609 | ambiguous | 0.5438 | ambiguous | -0.58 | Destabilizing | 0.986 | D | 0.657 | neutral | None | None | None | None | N |
T/L | 0.1656 | likely_benign | 0.1418 | benign | -0.112 | Destabilizing | 0.778 | D | 0.513 | neutral | None | None | None | None | N |
T/M | 0.1186 | likely_benign | 0.1113 | benign | 0.05 | Stabilizing | 0.807 | D | 0.413 | neutral | None | None | None | None | N |
T/N | 0.1904 | likely_benign | 0.1739 | benign | -0.418 | Destabilizing | 0.982 | D | 0.572 | neutral | N | 0.472004349 | None | None | N |
T/P | 0.1309 | likely_benign | 0.1123 | benign | -0.244 | Destabilizing | 0.991 | D | 0.717 | prob.delet. | N | 0.477232399 | None | None | N |
T/Q | 0.4572 | ambiguous | 0.4174 | ambiguous | -0.573 | Destabilizing | 0.993 | D | 0.72 | prob.delet. | None | None | None | None | N |
T/R | 0.5318 | ambiguous | 0.5097 | ambiguous | -0.313 | Destabilizing | 0.986 | D | 0.717 | prob.delet. | None | None | None | None | N |
T/S | 0.1465 | likely_benign | 0.1249 | benign | -0.701 | Destabilizing | 0.17 | N | 0.361 | neutral | N | 0.452507313 | None | None | N |
T/V | 0.2653 | likely_benign | 0.2479 | benign | -0.244 | Destabilizing | 0.91 | D | 0.461 | neutral | None | None | None | None | N |
T/W | 0.7948 | likely_pathogenic | 0.781 | pathogenic | -0.729 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | N |
T/Y | 0.5296 | ambiguous | 0.4945 | ambiguous | -0.491 | Destabilizing | 0.993 | D | 0.749 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.