Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31384 | 94375;94376;94377 | chr2:178547476;178547475;178547474 | chr2:179412203;179412202;179412201 |
N2AB | 29743 | 89452;89453;89454 | chr2:178547476;178547475;178547474 | chr2:179412203;179412202;179412201 |
N2A | 28816 | 86671;86672;86673 | chr2:178547476;178547475;178547474 | chr2:179412203;179412202;179412201 |
N2B | 22319 | 67180;67181;67182 | chr2:178547476;178547475;178547474 | chr2:179412203;179412202;179412201 |
Novex-1 | 22444 | 67555;67556;67557 | chr2:178547476;178547475;178547474 | chr2:179412203;179412202;179412201 |
Novex-2 | 22511 | 67756;67757;67758 | chr2:178547476;178547475;178547474 | chr2:179412203;179412202;179412201 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | rs369254232 | -3.168 | 0.549 | N | 0.693 | 0.219 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
S/G | rs369254232 | -3.168 | 0.549 | N | 0.693 | 0.219 | None | gnomAD-4.0.0 | 1.86045E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.54415E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1155 | likely_benign | 0.1198 | benign | -1.043 | Destabilizing | 0.127 | N | 0.54 | neutral | None | None | None | None | N |
S/C | 0.061 | likely_benign | 0.065 | benign | -1.141 | Destabilizing | 0.004 | N | 0.481 | neutral | N | 0.48384894 | None | None | N |
S/D | 0.9407 | likely_pathogenic | 0.9412 | pathogenic | -2.238 | Highly Destabilizing | 0.909 | D | 0.727 | prob.delet. | None | None | None | None | N |
S/E | 0.9225 | likely_pathogenic | 0.9212 | pathogenic | -2.053 | Highly Destabilizing | 0.909 | D | 0.736 | prob.delet. | None | None | None | None | N |
S/F | 0.3189 | likely_benign | 0.3301 | benign | -0.914 | Destabilizing | 0.85 | D | 0.691 | prob.neutral | None | None | None | None | N |
S/G | 0.2016 | likely_benign | 0.2032 | benign | -1.382 | Destabilizing | 0.549 | D | 0.693 | prob.neutral | N | 0.489966792 | None | None | N |
S/H | 0.5915 | likely_pathogenic | 0.5797 | pathogenic | -1.666 | Destabilizing | 0.992 | D | 0.7 | prob.neutral | None | None | None | None | N |
S/I | 0.4611 | ambiguous | 0.468 | ambiguous | -0.191 | Destabilizing | 0.379 | N | 0.681 | prob.neutral | N | 0.47580546 | None | None | N |
S/K | 0.9179 | likely_pathogenic | 0.9217 | pathogenic | -0.68 | Destabilizing | 0.766 | D | 0.731 | prob.delet. | None | None | None | None | N |
S/L | 0.2352 | likely_benign | 0.2335 | benign | -0.191 | Destabilizing | 0.25 | N | 0.705 | prob.neutral | None | None | None | None | N |
S/M | 0.3093 | likely_benign | 0.3214 | benign | -0.359 | Destabilizing | 0.127 | N | 0.636 | neutral | None | None | None | None | N |
S/N | 0.5084 | ambiguous | 0.4993 | ambiguous | -1.435 | Destabilizing | 0.883 | D | 0.725 | prob.delet. | N | 0.477938923 | None | None | N |
S/P | 0.9946 | likely_pathogenic | 0.9944 | pathogenic | -0.444 | Destabilizing | 0.972 | D | 0.738 | prob.delet. | None | None | None | None | N |
S/Q | 0.7103 | likely_pathogenic | 0.7044 | pathogenic | -1.239 | Destabilizing | 0.92 | D | 0.741 | deleterious | None | None | None | None | N |
S/R | 0.7887 | likely_pathogenic | 0.7957 | pathogenic | -0.919 | Destabilizing | 0.896 | D | 0.738 | prob.delet. | N | 0.396843244 | None | None | N |
S/T | 0.202 | likely_benign | 0.2052 | benign | -1.03 | Destabilizing | 0.549 | D | 0.67 | neutral | N | 0.478344333 | None | None | N |
S/V | 0.4275 | ambiguous | 0.4152 | ambiguous | -0.444 | Destabilizing | 0.447 | N | 0.689 | prob.neutral | None | None | None | None | N |
S/W | 0.5883 | likely_pathogenic | 0.6048 | pathogenic | -1.224 | Destabilizing | 0.992 | D | 0.725 | prob.delet. | None | None | None | None | N |
S/Y | 0.3408 | ambiguous | 0.342 | ambiguous | -0.781 | Destabilizing | 0.972 | D | 0.696 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.