Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31388 | 94387;94388;94389 | chr2:178547464;178547463;178547462 | chr2:179412191;179412190;179412189 |
N2AB | 29747 | 89464;89465;89466 | chr2:178547464;178547463;178547462 | chr2:179412191;179412190;179412189 |
N2A | 28820 | 86683;86684;86685 | chr2:178547464;178547463;178547462 | chr2:179412191;179412190;179412189 |
N2B | 22323 | 67192;67193;67194 | chr2:178547464;178547463;178547462 | chr2:179412191;179412190;179412189 |
Novex-1 | 22448 | 67567;67568;67569 | chr2:178547464;178547463;178547462 | chr2:179412191;179412190;179412189 |
Novex-2 | 22515 | 67768;67769;67770 | chr2:178547464;178547463;178547462 | chr2:179412191;179412190;179412189 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/I | None | None | 0.998 | N | 0.596 | 0.407 | 0.623091695385 | gnomAD-4.0.0 | 1.59618E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 1.88807E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.8763 | likely_pathogenic | 0.8201 | pathogenic | -0.155 | Destabilizing | 0.931 | D | 0.491 | neutral | None | None | None | None | I |
R/C | 0.5254 | ambiguous | 0.4618 | ambiguous | -0.242 | Destabilizing | 1.0 | D | 0.614 | neutral | None | None | None | None | I |
R/D | 0.9656 | likely_pathogenic | 0.9558 | pathogenic | -0.056 | Destabilizing | 0.996 | D | 0.549 | neutral | None | None | None | None | I |
R/E | 0.8847 | likely_pathogenic | 0.8407 | pathogenic | 0.028 | Stabilizing | 0.97 | D | 0.445 | neutral | None | None | None | None | I |
R/F | 0.9382 | likely_pathogenic | 0.918 | pathogenic | -0.337 | Destabilizing | 0.999 | D | 0.585 | neutral | None | None | None | None | I |
R/G | 0.8484 | likely_pathogenic | 0.7935 | pathogenic | -0.375 | Destabilizing | 0.98 | D | 0.572 | neutral | N | 0.496348517 | None | None | I |
R/H | 0.3453 | ambiguous | 0.2993 | benign | -1.025 | Destabilizing | 0.999 | D | 0.445 | neutral | None | None | None | None | I |
R/I | 0.6931 | likely_pathogenic | 0.6139 | pathogenic | 0.397 | Stabilizing | 0.998 | D | 0.596 | neutral | N | 0.465705897 | None | None | I |
R/K | 0.2723 | likely_benign | 0.2353 | benign | -0.169 | Destabilizing | 0.122 | N | 0.201 | neutral | N | 0.397344676 | None | None | I |
R/L | 0.6956 | likely_pathogenic | 0.6069 | pathogenic | 0.397 | Stabilizing | 0.985 | D | 0.572 | neutral | None | None | None | None | I |
R/M | 0.7631 | likely_pathogenic | 0.694 | pathogenic | -0.055 | Destabilizing | 1.0 | D | 0.533 | neutral | None | None | None | None | I |
R/N | 0.9332 | likely_pathogenic | 0.9092 | pathogenic | 0.067 | Stabilizing | 0.985 | D | 0.467 | neutral | None | None | None | None | I |
R/P | 0.8899 | likely_pathogenic | 0.8519 | pathogenic | 0.234 | Stabilizing | 0.999 | D | 0.589 | neutral | None | None | None | None | I |
R/Q | 0.3194 | likely_benign | 0.2697 | benign | -0.008 | Destabilizing | 0.97 | D | 0.492 | neutral | None | None | None | None | I |
R/S | 0.9159 | likely_pathogenic | 0.8912 | pathogenic | -0.331 | Destabilizing | 0.961 | D | 0.552 | neutral | N | 0.446714704 | None | None | I |
R/T | 0.8045 | likely_pathogenic | 0.7389 | pathogenic | -0.096 | Destabilizing | 0.98 | D | 0.565 | neutral | N | 0.487945251 | None | None | I |
R/V | 0.7981 | likely_pathogenic | 0.7319 | pathogenic | 0.234 | Stabilizing | 0.996 | D | 0.556 | neutral | None | None | None | None | I |
R/W | 0.6111 | likely_pathogenic | 0.5696 | pathogenic | -0.354 | Destabilizing | 1.0 | D | 0.629 | neutral | None | None | None | None | I |
R/Y | 0.8041 | likely_pathogenic | 0.7688 | pathogenic | 0.048 | Stabilizing | 0.999 | D | 0.591 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.