Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3139 | 9640;9641;9642 | chr2:178767815;178767814;178767813 | chr2:179632542;179632541;179632540 |
N2AB | 3139 | 9640;9641;9642 | chr2:178767815;178767814;178767813 | chr2:179632542;179632541;179632540 |
N2A | 3139 | 9640;9641;9642 | chr2:178767815;178767814;178767813 | chr2:179632542;179632541;179632540 |
N2B | 3093 | 9502;9503;9504 | chr2:178767815;178767814;178767813 | chr2:179632542;179632541;179632540 |
Novex-1 | 3093 | 9502;9503;9504 | chr2:178767815;178767814;178767813 | chr2:179632542;179632541;179632540 |
Novex-2 | 3093 | 9502;9503;9504 | chr2:178767815;178767814;178767813 | chr2:179632542;179632541;179632540 |
Novex-3 | 3139 | 9640;9641;9642 | chr2:178767815;178767814;178767813 | chr2:179632542;179632541;179632540 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs1346392116 | -0.06 | None | N | 0.116 | 0.063 | 0.0138822411134 | gnomAD-2.1.1 | 3.98E-06 | None | None | None | None | N | None | 0 | 2.89E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/N | rs1346392116 | -0.06 | None | N | 0.116 | 0.063 | 0.0138822411134 | gnomAD-4.0.0 | 1.36815E-06 | None | None | None | None | N | None | 0 | 4.47207E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/Q | None | None | None | N | 0.1 | 0.124 | 0.0482279557977 | gnomAD-4.0.0 | 1.59052E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43271E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.1577 | likely_benign | 0.145 | benign | -0.768 | Destabilizing | 0.002 | N | 0.253 | neutral | None | None | None | None | N |
K/C | 0.3916 | ambiguous | 0.3243 | benign | -0.624 | Destabilizing | 0.497 | N | 0.483 | neutral | None | None | None | None | N |
K/D | 0.1965 | likely_benign | 0.1531 | benign | 0.219 | Stabilizing | 0.004 | N | 0.271 | neutral | None | None | None | None | N |
K/E | 0.1173 | likely_benign | 0.1198 | benign | 0.35 | Stabilizing | 0.003 | N | 0.24 | neutral | N | 0.346911607 | None | None | N |
K/F | 0.4728 | ambiguous | 0.4641 | ambiguous | -0.396 | Destabilizing | 0.085 | N | 0.571 | neutral | None | None | None | None | N |
K/G | 0.2606 | likely_benign | 0.2591 | benign | -1.138 | Destabilizing | 0.004 | N | 0.281 | neutral | None | None | None | None | N |
K/H | 0.1065 | likely_benign | 0.0865 | benign | -1.296 | Destabilizing | None | N | 0.201 | neutral | None | None | None | None | N |
K/I | 0.1779 | likely_benign | 0.1791 | benign | 0.197 | Stabilizing | 0.033 | N | 0.552 | neutral | N | 0.309765095 | None | None | N |
K/L | 0.191 | likely_benign | 0.1844 | benign | 0.197 | Stabilizing | 0.018 | N | 0.313 | neutral | None | None | None | None | N |
K/M | 0.1281 | likely_benign | 0.1406 | benign | 0.038 | Stabilizing | 0.497 | N | 0.477 | neutral | None | None | None | None | N |
K/N | 0.0754 | likely_benign | 0.0568 | benign | -0.365 | Destabilizing | None | N | 0.116 | neutral | N | 0.343810882 | None | None | N |
K/P | 0.7797 | likely_pathogenic | 0.7485 | pathogenic | -0.096 | Destabilizing | 0.037 | N | 0.497 | neutral | None | None | None | None | N |
K/Q | 0.088 | likely_benign | 0.0862 | benign | -0.388 | Destabilizing | None | N | 0.1 | neutral | N | 0.349072024 | None | None | N |
K/R | 0.0765 | likely_benign | 0.0755 | benign | -0.431 | Destabilizing | 0.014 | N | 0.275 | neutral | N | 0.348012771 | None | None | N |
K/S | 0.1086 | likely_benign | 0.0867 | benign | -1.134 | Destabilizing | None | N | 0.111 | neutral | None | None | None | None | N |
K/T | 0.0675 | likely_benign | 0.0679 | benign | -0.782 | Destabilizing | None | N | 0.181 | neutral | N | 0.347248593 | None | None | N |
K/V | 0.1617 | likely_benign | 0.1591 | benign | -0.096 | Destabilizing | 0.018 | N | 0.373 | neutral | None | None | None | None | N |
K/W | 0.5757 | likely_pathogenic | 0.582 | pathogenic | -0.22 | Destabilizing | 0.788 | D | 0.47 | neutral | None | None | None | None | N |
K/Y | 0.247 | likely_benign | 0.2147 | benign | 0.043 | Stabilizing | 0.044 | N | 0.538 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.