Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31400 | 94423;94424;94425 | chr2:178547428;178547427;178547426 | chr2:179412155;179412154;179412153 |
N2AB | 29759 | 89500;89501;89502 | chr2:178547428;178547427;178547426 | chr2:179412155;179412154;179412153 |
N2A | 28832 | 86719;86720;86721 | chr2:178547428;178547427;178547426 | chr2:179412155;179412154;179412153 |
N2B | 22335 | 67228;67229;67230 | chr2:178547428;178547427;178547426 | chr2:179412155;179412154;179412153 |
Novex-1 | 22460 | 67603;67604;67605 | chr2:178547428;178547427;178547426 | chr2:179412155;179412154;179412153 |
Novex-2 | 22527 | 67804;67805;67806 | chr2:178547428;178547427;178547426 | chr2:179412155;179412154;179412153 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs1261202731 | None | 0.321 | N | 0.742 | 0.307 | 0.617248042353 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
I/T | rs1261202731 | None | 0.321 | N | 0.742 | 0.307 | 0.617248042353 | gnomAD-4.0.0 | 6.57082E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47003E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.5698 | likely_pathogenic | 0.6205 | pathogenic | -2.177 | Highly Destabilizing | 0.239 | N | 0.63 | neutral | None | None | None | None | N |
I/C | 0.6897 | likely_pathogenic | 0.7071 | pathogenic | -1.402 | Destabilizing | 0.944 | D | 0.707 | prob.delet. | None | None | None | None | N |
I/D | 0.9705 | likely_pathogenic | 0.976 | pathogenic | -1.9 | Destabilizing | 0.817 | D | 0.83 | deleterious | None | None | None | None | N |
I/E | 0.8995 | likely_pathogenic | 0.9165 | pathogenic | -1.728 | Destabilizing | 0.817 | D | 0.791 | deleterious | None | None | None | None | N |
I/F | 0.2406 | likely_benign | 0.2725 | benign | -1.226 | Destabilizing | 0.687 | D | 0.648 | neutral | None | None | None | None | N |
I/G | 0.8938 | likely_pathogenic | 0.9084 | pathogenic | -2.661 | Highly Destabilizing | 0.817 | D | 0.771 | deleterious | None | None | None | None | N |
I/H | 0.8563 | likely_pathogenic | 0.8741 | pathogenic | -1.783 | Destabilizing | 0.981 | D | 0.823 | deleterious | None | None | None | None | N |
I/K | 0.7677 | likely_pathogenic | 0.8197 | pathogenic | -1.635 | Destabilizing | 0.771 | D | 0.806 | deleterious | N | 0.490243054 | None | None | N |
I/L | 0.1393 | likely_benign | 0.1443 | benign | -0.821 | Destabilizing | 0.041 | N | 0.428 | neutral | N | 0.511742044 | None | None | N |
I/M | 0.1286 | likely_benign | 0.134 | benign | -0.718 | Destabilizing | 0.624 | D | 0.619 | neutral | N | 0.481384638 | None | None | N |
I/N | 0.8263 | likely_pathogenic | 0.8454 | pathogenic | -1.808 | Destabilizing | 0.931 | D | 0.816 | deleterious | None | None | None | None | N |
I/P | 0.9798 | likely_pathogenic | 0.9851 | pathogenic | -1.249 | Destabilizing | 0.931 | D | 0.826 | deleterious | None | None | None | None | N |
I/Q | 0.7872 | likely_pathogenic | 0.8093 | pathogenic | -1.753 | Destabilizing | 0.931 | D | 0.804 | deleterious | None | None | None | None | N |
I/R | 0.7161 | likely_pathogenic | 0.778 | pathogenic | -1.245 | Destabilizing | 0.771 | D | 0.821 | deleterious | N | 0.490243054 | None | None | N |
I/S | 0.7393 | likely_pathogenic | 0.7597 | pathogenic | -2.531 | Highly Destabilizing | 0.687 | D | 0.661 | prob.neutral | None | None | None | None | N |
I/T | 0.4949 | ambiguous | 0.5122 | ambiguous | -2.213 | Highly Destabilizing | 0.321 | N | 0.742 | deleterious | N | 0.461970581 | None | None | N |
I/V | 0.0548 | likely_benign | 0.0548 | benign | -1.249 | Destabilizing | 0.001 | N | 0.207 | neutral | N | 0.421197397 | None | None | N |
I/W | 0.9253 | likely_pathogenic | 0.9392 | pathogenic | -1.442 | Destabilizing | 0.981 | D | 0.766 | deleterious | None | None | None | None | N |
I/Y | 0.7606 | likely_pathogenic | 0.8038 | pathogenic | -1.175 | Destabilizing | 0.817 | D | 0.717 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.