Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31434 | 94525;94526;94527 | chr2:178547225;178547224;178547223 | chr2:179411952;179411951;179411950 |
N2AB | 29793 | 89602;89603;89604 | chr2:178547225;178547224;178547223 | chr2:179411952;179411951;179411950 |
N2A | 28866 | 86821;86822;86823 | chr2:178547225;178547224;178547223 | chr2:179411952;179411951;179411950 |
N2B | 22369 | 67330;67331;67332 | chr2:178547225;178547224;178547223 | chr2:179411952;179411951;179411950 |
Novex-1 | 22494 | 67705;67706;67707 | chr2:178547225;178547224;178547223 | chr2:179411952;179411951;179411950 |
Novex-2 | 22561 | 67906;67907;67908 | chr2:178547225;178547224;178547223 | chr2:179411952;179411951;179411950 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Y | rs773946401 | 0.985 | 0.985 | N | 0.303 | 0.309 | 0.228597637076 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 9.81E-05 | None | 0 | 0 | 0 |
H/Y | rs773946401 | 0.985 | 0.985 | N | 0.303 | 0.309 | 0.228597637076 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07297E-04 | 0 |
H/Y | rs773946401 | 0.985 | 0.985 | N | 0.303 | 0.309 | 0.228597637076 | gnomAD-4.0.0 | 7.68675E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 8.04096E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.4058 | ambiguous | 0.4255 | ambiguous | -0.07 | Destabilizing | 0.025 | N | 0.117 | neutral | None | None | None | None | I |
H/C | 0.2568 | likely_benign | 0.273 | benign | 0.472 | Stabilizing | 0.999 | D | 0.335 | neutral | None | None | None | None | I |
H/D | 0.354 | ambiguous | 0.3731 | ambiguous | 0.025 | Stabilizing | 0.013 | N | 0.103 | neutral | N | 0.396493741 | None | None | I |
H/E | 0.4786 | ambiguous | 0.526 | ambiguous | 0.068 | Stabilizing | 0.739 | D | 0.304 | neutral | None | None | None | None | I |
H/F | 0.4082 | ambiguous | 0.4123 | ambiguous | 0.674 | Stabilizing | 0.997 | D | 0.365 | neutral | None | None | None | None | I |
H/G | 0.4911 | ambiguous | 0.5006 | ambiguous | -0.372 | Destabilizing | 0.85 | D | 0.383 | neutral | None | None | None | None | I |
H/I | 0.4686 | ambiguous | 0.5421 | ambiguous | 0.714 | Stabilizing | 0.99 | D | 0.434 | neutral | None | None | None | None | I |
H/K | 0.4771 | ambiguous | 0.5456 | ambiguous | -0.01 | Destabilizing | 0.932 | D | 0.379 | neutral | None | None | None | None | I |
H/L | 0.2108 | likely_benign | 0.239 | benign | 0.714 | Stabilizing | 0.912 | D | 0.441 | neutral | N | 0.474858524 | None | None | I |
H/M | 0.5651 | likely_pathogenic | 0.6124 | pathogenic | 0.536 | Stabilizing | 0.997 | D | 0.345 | neutral | None | None | None | None | I |
H/N | 0.1273 | likely_benign | 0.1507 | benign | -0.017 | Destabilizing | 0.055 | N | 0.061 | neutral | N | 0.397552533 | None | None | I |
H/P | 0.7914 | likely_pathogenic | 0.8099 | pathogenic | 0.478 | Stabilizing | 0.955 | D | 0.425 | neutral | N | 0.489635975 | None | None | I |
H/Q | 0.2758 | likely_benign | 0.3122 | benign | 0.113 | Stabilizing | 0.982 | D | 0.296 | neutral | N | 0.45913971 | None | None | I |
H/R | 0.2266 | likely_benign | 0.2598 | benign | -0.523 | Destabilizing | 0.955 | D | 0.249 | neutral | N | 0.447461279 | None | None | I |
H/S | 0.2512 | likely_benign | 0.2705 | benign | -0.021 | Destabilizing | 0.739 | D | 0.362 | neutral | None | None | None | None | I |
H/T | 0.3412 | ambiguous | 0.3895 | ambiguous | 0.127 | Stabilizing | 0.85 | D | 0.402 | neutral | None | None | None | None | I |
H/V | 0.3878 | ambiguous | 0.4487 | ambiguous | 0.478 | Stabilizing | 0.932 | D | 0.475 | neutral | None | None | None | None | I |
H/W | 0.5828 | likely_pathogenic | 0.564 | pathogenic | 0.761 | Stabilizing | 0.999 | D | 0.365 | neutral | None | None | None | None | I |
H/Y | 0.1573 | likely_benign | 0.1602 | benign | 1.006 | Stabilizing | 0.985 | D | 0.303 | neutral | N | 0.392589431 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.