Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31488 | 94687;94688;94689 | chr2:178547063;178547062;178547061 | chr2:179411790;179411789;179411788 |
N2AB | 29847 | 89764;89765;89766 | chr2:178547063;178547062;178547061 | chr2:179411790;179411789;179411788 |
N2A | 28920 | 86983;86984;86985 | chr2:178547063;178547062;178547061 | chr2:179411790;179411789;179411788 |
N2B | 22423 | 67492;67493;67494 | chr2:178547063;178547062;178547061 | chr2:179411790;179411789;179411788 |
Novex-1 | 22548 | 67867;67868;67869 | chr2:178547063;178547062;178547061 | chr2:179411790;179411789;179411788 |
Novex-2 | 22615 | 68068;68069;68070 | chr2:178547063;178547062;178547061 | chr2:179411790;179411789;179411788 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/D | None | None | 0.998 | N | 0.599 | 0.408 | 0.577403499239 | gnomAD-4.0.0 | 1.59141E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85879E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4554 | ambiguous | 0.4455 | ambiguous | -0.86 | Destabilizing | 1.0 | D | 0.281 | neutral | None | None | None | None | I |
A/D | 0.4489 | ambiguous | 0.4353 | ambiguous | -0.367 | Destabilizing | 0.998 | D | 0.599 | neutral | N | 0.461049438 | None | None | I |
A/E | 0.3331 | likely_benign | 0.3338 | benign | -0.506 | Destabilizing | 0.999 | D | 0.428 | neutral | None | None | None | None | I |
A/F | 0.3355 | likely_benign | 0.3224 | benign | -0.822 | Destabilizing | 0.991 | D | 0.59 | neutral | None | None | None | None | I |
A/G | 0.2242 | likely_benign | 0.1937 | benign | -0.37 | Destabilizing | 0.993 | D | 0.297 | neutral | N | 0.517859939 | None | None | I |
A/H | 0.5197 | ambiguous | 0.4994 | ambiguous | -0.294 | Destabilizing | 1.0 | D | 0.583 | neutral | None | None | None | None | I |
A/I | 0.146 | likely_benign | 0.1492 | benign | -0.334 | Destabilizing | 0.304 | N | 0.209 | neutral | None | None | None | None | I |
A/K | 0.5487 | ambiguous | 0.548 | ambiguous | -0.646 | Destabilizing | 0.999 | D | 0.426 | neutral | None | None | None | None | I |
A/L | 0.1176 | likely_benign | 0.1216 | benign | -0.334 | Destabilizing | 0.092 | N | 0.217 | neutral | None | None | None | None | I |
A/M | 0.1312 | likely_benign | 0.1376 | benign | -0.474 | Destabilizing | 0.991 | D | 0.433 | neutral | None | None | None | None | I |
A/N | 0.2757 | likely_benign | 0.2512 | benign | -0.393 | Destabilizing | 0.999 | D | 0.587 | neutral | None | None | None | None | I |
A/P | 0.5736 | likely_pathogenic | 0.4551 | ambiguous | -0.291 | Destabilizing | 0.998 | D | 0.442 | neutral | N | 0.500685262 | None | None | I |
A/Q | 0.3721 | ambiguous | 0.3614 | ambiguous | -0.639 | Destabilizing | 0.999 | D | 0.427 | neutral | None | None | None | None | I |
A/R | 0.5303 | ambiguous | 0.5241 | ambiguous | -0.182 | Destabilizing | 0.999 | D | 0.441 | neutral | None | None | None | None | I |
A/S | 0.1091 | likely_benign | 0.1018 | benign | -0.63 | Destabilizing | 0.993 | D | 0.327 | neutral | N | 0.453238032 | None | None | I |
A/T | 0.0831 | likely_benign | 0.0818 | benign | -0.681 | Destabilizing | 0.98 | D | 0.311 | neutral | N | 0.502818703 | None | None | I |
A/V | 0.0915 | likely_benign | 0.0896 | benign | -0.291 | Destabilizing | 0.835 | D | 0.313 | neutral | N | 0.497932958 | None | None | I |
A/W | 0.7829 | likely_pathogenic | 0.7553 | pathogenic | -0.959 | Destabilizing | 1.0 | D | 0.682 | prob.neutral | None | None | None | None | I |
A/Y | 0.4751 | ambiguous | 0.4542 | ambiguous | -0.618 | Destabilizing | 0.999 | D | 0.585 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.