Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31507 | 94744;94745;94746 | chr2:178547006;178547005;178547004 | chr2:179411733;179411732;179411731 |
N2AB | 29866 | 89821;89822;89823 | chr2:178547006;178547005;178547004 | chr2:179411733;179411732;179411731 |
N2A | 28939 | 87040;87041;87042 | chr2:178547006;178547005;178547004 | chr2:179411733;179411732;179411731 |
N2B | 22442 | 67549;67550;67551 | chr2:178547006;178547005;178547004 | chr2:179411733;179411732;179411731 |
Novex-1 | 22567 | 67924;67925;67926 | chr2:178547006;178547005;178547004 | chr2:179411733;179411732;179411731 |
Novex-2 | 22634 | 68125;68126;68127 | chr2:178547006;178547005;178547004 | chr2:179411733;179411732;179411731 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs371097838 | -1.415 | 0.997 | N | 0.456 | 0.357 | None | gnomAD-2.1.1 | 3.18E-05 | None | None | None | None | N | None | 1.14732E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/A | rs371097838 | -1.415 | 0.997 | N | 0.456 | 0.357 | None | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/A | rs371097838 | -1.415 | 0.997 | N | 0.456 | 0.357 | None | gnomAD-4.0.0 | 4.35404E-06 | None | None | None | None | N | None | 6.69649E-05 | 0 | None | 0 | 0 | None | 1.56853E-05 | 0 | 8.50608E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7119 | likely_pathogenic | 0.669 | pathogenic | -1.855 | Destabilizing | 0.997 | D | 0.456 | neutral | N | 0.483437831 | None | None | N |
V/C | 0.8873 | likely_pathogenic | 0.8839 | pathogenic | -1.548 | Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | N |
V/D | 0.9964 | likely_pathogenic | 0.9966 | pathogenic | -2.431 | Highly Destabilizing | 0.999 | D | 0.741 | deleterious | N | 0.496315073 | None | None | N |
V/E | 0.9889 | likely_pathogenic | 0.9892 | pathogenic | -2.362 | Highly Destabilizing | 0.999 | D | 0.774 | deleterious | None | None | None | None | N |
V/F | 0.9053 | likely_pathogenic | 0.9113 | pathogenic | -1.301 | Destabilizing | 0.999 | D | 0.741 | deleterious | N | 0.471181579 | None | None | N |
V/G | 0.9145 | likely_pathogenic | 0.9132 | pathogenic | -2.233 | Highly Destabilizing | 0.999 | D | 0.726 | deleterious | N | 0.496315073 | None | None | N |
V/H | 0.9976 | likely_pathogenic | 0.9977 | pathogenic | -1.759 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
V/I | 0.1139 | likely_benign | 0.1202 | benign | -0.866 | Destabilizing | 0.994 | D | 0.551 | neutral | N | 0.444744339 | None | None | N |
V/K | 0.994 | likely_pathogenic | 0.9941 | pathogenic | -1.476 | Destabilizing | 0.999 | D | 0.77 | deleterious | None | None | None | None | N |
V/L | 0.6921 | likely_pathogenic | 0.7003 | pathogenic | -0.866 | Destabilizing | 0.994 | D | 0.545 | neutral | N | 0.505427439 | None | None | N |
V/M | 0.654 | likely_pathogenic | 0.6717 | pathogenic | -0.851 | Destabilizing | 0.999 | D | 0.73 | deleterious | None | None | None | None | N |
V/N | 0.9843 | likely_pathogenic | 0.9858 | pathogenic | -1.501 | Destabilizing | 0.999 | D | 0.772 | deleterious | None | None | None | None | N |
V/P | 0.912 | likely_pathogenic | 0.9007 | pathogenic | -1.166 | Destabilizing | 0.999 | D | 0.775 | deleterious | None | None | None | None | N |
V/Q | 0.9877 | likely_pathogenic | 0.9879 | pathogenic | -1.623 | Destabilizing | 0.999 | D | 0.821 | deleterious | None | None | None | None | N |
V/R | 0.9876 | likely_pathogenic | 0.9873 | pathogenic | -1.035 | Destabilizing | 0.999 | D | 0.768 | deleterious | None | None | None | None | N |
V/S | 0.9101 | likely_pathogenic | 0.9016 | pathogenic | -2.025 | Highly Destabilizing | 0.999 | D | 0.787 | deleterious | None | None | None | None | N |
V/T | 0.7293 | likely_pathogenic | 0.7249 | pathogenic | -1.847 | Destabilizing | 0.998 | D | 0.737 | deleterious | None | None | None | None | N |
V/W | 0.9984 | likely_pathogenic | 0.9983 | pathogenic | -1.601 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
V/Y | 0.9939 | likely_pathogenic | 0.9937 | pathogenic | -1.3 | Destabilizing | 0.999 | D | 0.754 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.