Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31516 | 94771;94772;94773 | chr2:178546882;178546881;178546880 | chr2:179411609;179411608;179411607 |
N2AB | 29875 | 89848;89849;89850 | chr2:178546882;178546881;178546880 | chr2:179411609;179411608;179411607 |
N2A | 28948 | 87067;87068;87069 | chr2:178546882;178546881;178546880 | chr2:179411609;179411608;179411607 |
N2B | 22451 | 67576;67577;67578 | chr2:178546882;178546881;178546880 | chr2:179411609;179411608;179411607 |
Novex-1 | 22576 | 67951;67952;67953 | chr2:178546882;178546881;178546880 | chr2:179411609;179411608;179411607 |
Novex-2 | 22643 | 68152;68153;68154 | chr2:178546882;178546881;178546880 | chr2:179411609;179411608;179411607 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.996 | N | 0.491 | 0.288 | 0.324161360171 | gnomAD-4.0.0 | 1.65131E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.98093E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1332 | likely_benign | 0.1461 | benign | -0.54 | Destabilizing | 0.996 | D | 0.491 | neutral | N | 0.501301337 | None | None | N |
T/C | 0.4983 | ambiguous | 0.5173 | ambiguous | -0.371 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
T/D | 0.7664 | likely_pathogenic | 0.7589 | pathogenic | 0.472 | Stabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | N |
T/E | 0.5867 | likely_pathogenic | 0.5954 | pathogenic | 0.437 | Stabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | N |
T/F | 0.4266 | ambiguous | 0.468 | ambiguous | -0.853 | Destabilizing | 0.996 | D | 0.723 | prob.delet. | None | None | None | None | N |
T/G | 0.437 | ambiguous | 0.4451 | ambiguous | -0.728 | Destabilizing | 1.0 | D | 0.64 | neutral | None | None | None | None | N |
T/H | 0.4784 | ambiguous | 0.5045 | ambiguous | -0.937 | Destabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | N |
T/I | 0.245 | likely_benign | 0.2367 | benign | -0.154 | Destabilizing | 0.999 | D | 0.717 | prob.delet. | N | 0.460012075 | None | None | N |
T/K | 0.3295 | likely_benign | 0.3426 | ambiguous | -0.334 | Destabilizing | 0.999 | D | 0.688 | prob.neutral | N | 0.515345283 | None | None | N |
T/L | 0.149 | likely_benign | 0.1594 | benign | -0.154 | Destabilizing | 0.994 | D | 0.6 | neutral | None | None | None | None | N |
T/M | 0.0981 | likely_benign | 0.1061 | benign | -0.044 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | N |
T/N | 0.3065 | likely_benign | 0.2981 | benign | -0.232 | Destabilizing | 1.0 | D | 0.652 | neutral | None | None | None | None | N |
T/P | 0.7343 | likely_pathogenic | 0.7439 | pathogenic | -0.252 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | N | 0.489325363 | None | None | N |
T/Q | 0.3672 | ambiguous | 0.3832 | ambiguous | -0.384 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
T/R | 0.2706 | likely_benign | 0.2882 | benign | -0.12 | Destabilizing | 0.999 | D | 0.734 | prob.delet. | N | 0.483436333 | None | None | N |
T/S | 0.1818 | likely_benign | 0.1824 | benign | -0.543 | Destabilizing | 0.996 | D | 0.493 | neutral | N | 0.483192792 | None | None | N |
T/V | 0.1778 | likely_benign | 0.1788 | benign | -0.252 | Destabilizing | 0.994 | D | 0.556 | neutral | None | None | None | None | N |
T/W | 0.7348 | likely_pathogenic | 0.7573 | pathogenic | -0.812 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
T/Y | 0.4753 | ambiguous | 0.5191 | ambiguous | -0.54 | Destabilizing | 0.833 | D | 0.309 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.