Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31555 | 94888;94889;94890 | chr2:178546765;178546764;178546763 | chr2:179411492;179411491;179411490 |
N2AB | 29914 | 89965;89966;89967 | chr2:178546765;178546764;178546763 | chr2:179411492;179411491;179411490 |
N2A | 28987 | 87184;87185;87186 | chr2:178546765;178546764;178546763 | chr2:179411492;179411491;179411490 |
N2B | 22490 | 67693;67694;67695 | chr2:178546765;178546764;178546763 | chr2:179411492;179411491;179411490 |
Novex-1 | 22615 | 68068;68069;68070 | chr2:178546765;178546764;178546763 | chr2:179411492;179411491;179411490 |
Novex-2 | 22682 | 68269;68270;68271 | chr2:178546765;178546764;178546763 | chr2:179411492;179411491;179411490 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/C | rs757099797 | -0.48 | 1.0 | N | 0.811 | 0.421 | 0.785964137318 | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
R/C | rs757099797 | -0.48 | 1.0 | N | 0.811 | 0.421 | 0.785964137318 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
R/C | rs757099797 | -0.48 | 1.0 | N | 0.811 | 0.421 | 0.785964137318 | gnomAD-4.0.0 | 7.43707E-06 | None | None | None | None | N | None | 4.00716E-05 | 3.33467E-05 | None | 0 | 0 | None | 0 | 0 | 5.93353E-06 | 0 | 0 |
R/G | rs757099797 | -0.673 | 1.0 | D | 0.692 | 0.401 | 0.706445215409 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 9.8E-05 | None | 0 | 0 | 0 |
R/G | rs757099797 | -0.673 | 1.0 | D | 0.692 | 0.401 | 0.706445215409 | gnomAD-4.0.0 | 4.78956E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 8.11632E-05 | 0 |
R/H | rs727503545 | -0.901 | 1.0 | N | 0.839 | 0.427 | 0.423597194605 | gnomAD-2.1.1 | 6.8E-05 | None | None | None | None | N | None | 0 | 3.67938E-04 | None | 0 | 0 | None | 0 | None | 0 | 2.35E-05 | 4.21467E-04 |
R/H | rs727503545 | -0.901 | 1.0 | N | 0.839 | 0.427 | 0.423597194605 | gnomAD-3.1.2 | 3.95E-05 | None | None | None | None | N | None | 0 | 2.62055E-04 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 2.07211E-04 | 0 |
R/H | rs727503545 | -0.901 | 1.0 | N | 0.839 | 0.427 | 0.423597194605 | gnomAD-4.0.0 | 2.293E-05 | None | None | None | None | N | None | 0 | 4.16792E-04 | None | 3.37838E-05 | 0 | None | 0 | 0 | 5.93345E-06 | 1.09794E-05 | 4.80323E-05 |
R/L | rs727503545 | None | 1.0 | D | 0.692 | 0.388 | 0.705509371873 | gnomAD-4.0.0 | 1.36844E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79899E-06 | 0 | 0 |
R/S | None | None | 1.0 | N | 0.721 | 0.419 | 0.542187413537 | gnomAD-4.0.0 | 6.84226E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15955E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.9 | likely_pathogenic | 0.8218 | pathogenic | 0.066 | Stabilizing | 0.999 | D | 0.675 | prob.neutral | None | None | None | None | N |
R/C | 0.5976 | likely_pathogenic | 0.4598 | ambiguous | -0.332 | Destabilizing | 1.0 | D | 0.811 | deleterious | N | 0.515762455 | None | None | N |
R/D | 0.949 | likely_pathogenic | 0.915 | pathogenic | -0.307 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
R/E | 0.8242 | likely_pathogenic | 0.7472 | pathogenic | -0.253 | Destabilizing | 0.999 | D | 0.736 | prob.delet. | None | None | None | None | N |
R/F | 0.9225 | likely_pathogenic | 0.8652 | pathogenic | -0.258 | Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | N |
R/G | 0.7979 | likely_pathogenic | 0.6884 | pathogenic | -0.083 | Destabilizing | 1.0 | D | 0.692 | prob.neutral | D | 0.524746705 | None | None | N |
R/H | 0.2993 | likely_benign | 0.2279 | benign | -0.611 | Destabilizing | 1.0 | D | 0.839 | deleterious | N | 0.490403271 | None | None | N |
R/I | 0.7809 | likely_pathogenic | 0.6415 | pathogenic | 0.413 | Stabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
R/K | 0.2321 | likely_benign | 0.1706 | benign | -0.176 | Destabilizing | 0.998 | D | 0.704 | prob.neutral | None | None | None | None | N |
R/L | 0.7066 | likely_pathogenic | 0.5925 | pathogenic | 0.413 | Stabilizing | 1.0 | D | 0.692 | prob.neutral | D | 0.532115395 | None | None | N |
R/M | 0.826 | likely_pathogenic | 0.709 | pathogenic | -0.119 | Destabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | N |
R/N | 0.9215 | likely_pathogenic | 0.8681 | pathogenic | -0.191 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
R/P | 0.9078 | likely_pathogenic | 0.8332 | pathogenic | 0.316 | Stabilizing | 1.0 | D | 0.769 | deleterious | N | 0.49740471 | None | None | N |
R/Q | 0.3033 | likely_benign | 0.2348 | benign | -0.182 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
R/S | 0.9193 | likely_pathogenic | 0.8614 | pathogenic | -0.348 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | N | 0.50527551 | None | None | N |
R/T | 0.8289 | likely_pathogenic | 0.706 | pathogenic | -0.18 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
R/V | 0.8389 | likely_pathogenic | 0.729 | pathogenic | 0.316 | Stabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
R/W | 0.5958 | likely_pathogenic | 0.4805 | ambiguous | -0.461 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
R/Y | 0.8164 | likely_pathogenic | 0.7144 | pathogenic | -0.039 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.