Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3157 | 9694;9695;9696 | chr2:178767761;178767760;178767759 | chr2:179632488;179632487;179632486 |
N2AB | 3157 | 9694;9695;9696 | chr2:178767761;178767760;178767759 | chr2:179632488;179632487;179632486 |
N2A | 3157 | 9694;9695;9696 | chr2:178767761;178767760;178767759 | chr2:179632488;179632487;179632486 |
N2B | 3111 | 9556;9557;9558 | chr2:178767761;178767760;178767759 | chr2:179632488;179632487;179632486 |
Novex-1 | 3111 | 9556;9557;9558 | chr2:178767761;178767760;178767759 | chr2:179632488;179632487;179632486 |
Novex-2 | 3111 | 9556;9557;9558 | chr2:178767761;178767760;178767759 | chr2:179632488;179632487;179632486 |
Novex-3 | 3157 | 9694;9695;9696 | chr2:178767761;178767760;178767759 | chr2:179632488;179632487;179632486 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/R | None | None | 0.801 | N | 0.342 | 0.213 | 0.265929055128 | gnomAD-4.0.0 | 2.05251E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79862E-06 | 1.15934E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.245 | likely_benign | 0.2987 | benign | -0.427 | Destabilizing | 0.325 | N | 0.343 | neutral | None | None | None | None | N |
Q/C | 0.771 | likely_pathogenic | 0.8487 | pathogenic | 0.058 | Stabilizing | 0.998 | D | 0.351 | neutral | None | None | None | None | N |
Q/D | 0.443 | ambiguous | 0.5572 | ambiguous | 0.253 | Stabilizing | 0.525 | D | 0.321 | neutral | None | None | None | None | N |
Q/E | 0.0805 | likely_benign | 0.1037 | benign | 0.3 | Stabilizing | 0.005 | N | 0.123 | neutral | N | 0.436750209 | None | None | N |
Q/F | 0.7808 | likely_pathogenic | 0.827 | pathogenic | -0.312 | Destabilizing | 0.991 | D | 0.384 | neutral | None | None | None | None | N |
Q/G | 0.449 | ambiguous | 0.5581 | ambiguous | -0.707 | Destabilizing | 0.688 | D | 0.339 | neutral | None | None | None | None | N |
Q/H | 0.256 | likely_benign | 0.2969 | benign | -0.403 | Destabilizing | 0.966 | D | 0.391 | neutral | N | 0.499531806 | None | None | N |
Q/I | 0.4855 | ambiguous | 0.5544 | ambiguous | 0.25 | Stabilizing | 0.949 | D | 0.417 | neutral | None | None | None | None | N |
Q/K | 0.1115 | likely_benign | 0.1793 | benign | 0.023 | Stabilizing | 0.454 | N | 0.367 | neutral | N | 0.457877147 | None | None | N |
Q/L | 0.1881 | likely_benign | 0.2358 | benign | 0.25 | Stabilizing | 0.801 | D | 0.381 | neutral | N | 0.510879594 | None | None | N |
Q/M | 0.4204 | ambiguous | 0.4872 | ambiguous | 0.419 | Stabilizing | 0.991 | D | 0.396 | neutral | None | None | None | None | N |
Q/N | 0.3325 | likely_benign | 0.3505 | ambiguous | -0.474 | Destabilizing | 0.842 | D | 0.297 | neutral | None | None | None | None | N |
Q/P | 0.2367 | likely_benign | 0.3219 | benign | 0.055 | Stabilizing | 0.891 | D | 0.433 | neutral | N | 0.512649789 | None | None | N |
Q/R | 0.138 | likely_benign | 0.2021 | benign | 0.127 | Stabilizing | 0.801 | D | 0.342 | neutral | N | 0.49795071 | None | None | N |
Q/S | 0.3091 | likely_benign | 0.3257 | benign | -0.569 | Destabilizing | 0.08 | N | 0.12 | neutral | None | None | None | None | N |
Q/T | 0.2095 | likely_benign | 0.2468 | benign | -0.332 | Destabilizing | 0.029 | N | 0.151 | neutral | None | None | None | None | N |
Q/V | 0.3166 | likely_benign | 0.3714 | ambiguous | 0.055 | Stabilizing | 0.842 | D | 0.403 | neutral | None | None | None | None | N |
Q/W | 0.6791 | likely_pathogenic | 0.7887 | pathogenic | -0.203 | Destabilizing | 0.998 | D | 0.362 | neutral | None | None | None | None | N |
Q/Y | 0.5903 | likely_pathogenic | 0.6566 | pathogenic | 0.024 | Stabilizing | 0.991 | D | 0.39 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.