Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31570 | 94933;94934;94935 | chr2:178546720;178546719;178546718 | chr2:179411447;179411446;179411445 |
N2AB | 29929 | 90010;90011;90012 | chr2:178546720;178546719;178546718 | chr2:179411447;179411446;179411445 |
N2A | 29002 | 87229;87230;87231 | chr2:178546720;178546719;178546718 | chr2:179411447;179411446;179411445 |
N2B | 22505 | 67738;67739;67740 | chr2:178546720;178546719;178546718 | chr2:179411447;179411446;179411445 |
Novex-1 | 22630 | 68113;68114;68115 | chr2:178546720;178546719;178546718 | chr2:179411447;179411446;179411445 |
Novex-2 | 22697 | 68314;68315;68316 | chr2:178546720;178546719;178546718 | chr2:179411447;179411446;179411445 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1697325593 | None | 0.999 | N | 0.609 | 0.484 | 0.349429436713 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.211 | likely_benign | 0.1708 | benign | -0.856 | Destabilizing | 0.999 | D | 0.609 | neutral | N | 0.493683911 | None | None | N |
T/C | 0.6726 | likely_pathogenic | 0.6212 | pathogenic | -0.43 | Destabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | N |
T/D | 0.8157 | likely_pathogenic | 0.7449 | pathogenic | 0.641 | Stabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
T/E | 0.6571 | likely_pathogenic | 0.5793 | pathogenic | 0.675 | Stabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | N |
T/F | 0.7377 | likely_pathogenic | 0.6606 | pathogenic | -0.96 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
T/G | 0.7367 | likely_pathogenic | 0.6582 | pathogenic | -1.115 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
T/H | 0.6014 | likely_pathogenic | 0.5158 | ambiguous | -1.209 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
T/I | 0.373 | ambiguous | 0.3356 | benign | -0.252 | Destabilizing | 1.0 | D | 0.786 | deleterious | N | 0.5038749 | None | None | N |
T/K | 0.5608 | ambiguous | 0.4816 | ambiguous | -0.212 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
T/L | 0.2475 | likely_benign | 0.2031 | benign | -0.252 | Destabilizing | 0.999 | D | 0.658 | neutral | None | None | None | None | N |
T/M | 0.1629 | likely_benign | 0.1442 | benign | -0.186 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
T/N | 0.3816 | ambiguous | 0.3029 | benign | -0.257 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | D | 0.523026191 | None | None | N |
T/P | 0.5053 | ambiguous | 0.3847 | ambiguous | -0.422 | Destabilizing | 1.0 | D | 0.793 | deleterious | N | 0.490418681 | None | None | N |
T/Q | 0.4616 | ambiguous | 0.3893 | ambiguous | -0.3 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
T/R | 0.5049 | ambiguous | 0.4265 | ambiguous | -0.127 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | N |
T/S | 0.2701 | likely_benign | 0.2156 | benign | -0.688 | Destabilizing | 0.999 | D | 0.568 | neutral | N | 0.490543585 | None | None | N |
T/V | 0.2242 | likely_benign | 0.2071 | benign | -0.422 | Destabilizing | 0.999 | D | 0.589 | neutral | None | None | None | None | N |
T/W | 0.9296 | likely_pathogenic | 0.9082 | pathogenic | -0.877 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
T/Y | 0.7723 | likely_pathogenic | 0.7018 | pathogenic | -0.608 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.