Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31579 | 94960;94961;94962 | chr2:178546693;178546692;178546691 | chr2:179411420;179411419;179411418 |
N2AB | 29938 | 90037;90038;90039 | chr2:178546693;178546692;178546691 | chr2:179411420;179411419;179411418 |
N2A | 29011 | 87256;87257;87258 | chr2:178546693;178546692;178546691 | chr2:179411420;179411419;179411418 |
N2B | 22514 | 67765;67766;67767 | chr2:178546693;178546692;178546691 | chr2:179411420;179411419;179411418 |
Novex-1 | 22639 | 68140;68141;68142 | chr2:178546693;178546692;178546691 | chr2:179411420;179411419;179411418 |
Novex-2 | 22706 | 68341;68342;68343 | chr2:178546693;178546692;178546691 | chr2:179411420;179411419;179411418 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1252165343 | -1.242 | 0.005 | N | 0.137 | 0.128 | 0.115124310173 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 9.81E-05 | None | 0 | 0 | 0 |
T/A | rs1252165343 | -1.242 | 0.005 | N | 0.137 | 0.128 | 0.115124310173 | gnomAD-4.0.0 | 2.73691E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99499E-07 | 3.47818E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0773 | likely_benign | 0.0711 | benign | -0.943 | Destabilizing | 0.005 | N | 0.137 | neutral | N | 0.463204309 | None | None | N |
T/C | 0.3707 | ambiguous | 0.3673 | ambiguous | -0.597 | Destabilizing | 0.998 | D | 0.535 | neutral | None | None | None | None | N |
T/D | 0.3742 | ambiguous | 0.3746 | ambiguous | -0.645 | Destabilizing | 0.728 | D | 0.483 | neutral | None | None | None | None | N |
T/E | 0.256 | likely_benign | 0.2658 | benign | -0.575 | Destabilizing | 0.016 | N | 0.261 | neutral | None | None | None | None | N |
T/F | 0.3228 | likely_benign | 0.3019 | benign | -0.783 | Destabilizing | 0.949 | D | 0.581 | neutral | None | None | None | None | N |
T/G | 0.2418 | likely_benign | 0.2259 | benign | -1.276 | Destabilizing | 0.728 | D | 0.499 | neutral | None | None | None | None | N |
T/H | 0.2801 | likely_benign | 0.2702 | benign | -1.549 | Destabilizing | 0.974 | D | 0.59 | neutral | None | None | None | None | N |
T/I | 0.1368 | likely_benign | 0.1317 | benign | -0.121 | Destabilizing | 0.669 | D | 0.511 | neutral | N | 0.49477801 | None | None | N |
T/K | 0.1937 | likely_benign | 0.2008 | benign | -0.788 | Destabilizing | 0.728 | D | 0.465 | neutral | None | None | None | None | N |
T/L | 0.1116 | likely_benign | 0.1069 | benign | -0.121 | Destabilizing | 0.525 | D | 0.398 | neutral | None | None | None | None | N |
T/M | 0.0998 | likely_benign | 0.0943 | benign | 0.093 | Stabilizing | 0.325 | N | 0.322 | neutral | None | None | None | None | N |
T/N | 0.1325 | likely_benign | 0.1308 | benign | -0.954 | Destabilizing | 0.801 | D | 0.527 | neutral | N | 0.459739929 | None | None | N |
T/P | 0.2412 | likely_benign | 0.1975 | benign | -0.362 | Destabilizing | 0.891 | D | 0.544 | neutral | N | 0.477384328 | None | None | N |
T/Q | 0.204 | likely_benign | 0.2038 | benign | -0.989 | Destabilizing | 0.172 | N | 0.311 | neutral | None | None | None | None | N |
T/R | 0.1595 | likely_benign | 0.1617 | benign | -0.707 | Destabilizing | 0.842 | D | 0.512 | neutral | None | None | None | None | N |
T/S | 0.1033 | likely_benign | 0.0997 | benign | -1.212 | Destabilizing | 0.454 | N | 0.414 | neutral | N | 0.425416712 | None | None | N |
T/V | 0.1084 | likely_benign | 0.1047 | benign | -0.362 | Destabilizing | 0.525 | D | 0.405 | neutral | None | None | None | None | N |
T/W | 0.706 | likely_pathogenic | 0.6813 | pathogenic | -0.782 | Destabilizing | 0.998 | D | 0.609 | neutral | None | None | None | None | N |
T/Y | 0.3278 | likely_benign | 0.3185 | benign | -0.516 | Destabilizing | 0.991 | D | 0.583 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.