Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31585 | 94978;94979;94980 | chr2:178546675;178546674;178546673 | chr2:179411402;179411401;179411400 |
N2AB | 29944 | 90055;90056;90057 | chr2:178546675;178546674;178546673 | chr2:179411402;179411401;179411400 |
N2A | 29017 | 87274;87275;87276 | chr2:178546675;178546674;178546673 | chr2:179411402;179411401;179411400 |
N2B | 22520 | 67783;67784;67785 | chr2:178546675;178546674;178546673 | chr2:179411402;179411401;179411400 |
Novex-1 | 22645 | 68158;68159;68160 | chr2:178546675;178546674;178546673 | chr2:179411402;179411401;179411400 |
Novex-2 | 22712 | 68359;68360;68361 | chr2:178546675;178546674;178546673 | chr2:179411402;179411401;179411400 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | None | None | 0.994 | N | 0.723 | 0.474 | 0.756187549339 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.5178 | ambiguous | 0.3892 | ambiguous | -2.758 | Highly Destabilizing | 0.97 | D | 0.716 | prob.delet. | None | None | None | None | N |
L/C | 0.6053 | likely_pathogenic | 0.5533 | ambiguous | -2.143 | Highly Destabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | N |
L/D | 0.9733 | likely_pathogenic | 0.9511 | pathogenic | -3.01 | Highly Destabilizing | 0.999 | D | 0.794 | deleterious | None | None | None | None | N |
L/E | 0.8107 | likely_pathogenic | 0.6974 | pathogenic | -2.854 | Highly Destabilizing | 0.999 | D | 0.772 | deleterious | None | None | None | None | N |
L/F | 0.1478 | likely_benign | 0.1317 | benign | -1.686 | Destabilizing | 0.989 | D | 0.645 | neutral | N | 0.390746778 | None | None | N |
L/G | 0.8786 | likely_pathogenic | 0.8165 | pathogenic | -3.219 | Highly Destabilizing | 0.996 | D | 0.759 | deleterious | None | None | None | None | N |
L/H | 0.4394 | ambiguous | 0.3504 | ambiguous | -2.388 | Highly Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
L/I | 0.1113 | likely_benign | 0.0898 | benign | -1.444 | Destabilizing | 0.122 | N | 0.393 | neutral | N | 0.348206722 | None | None | N |
L/K | 0.573 | likely_pathogenic | 0.4503 | ambiguous | -2.079 | Highly Destabilizing | 0.996 | D | 0.728 | prob.delet. | None | None | None | None | N |
L/M | 0.1134 | likely_benign | 0.1 | benign | -1.466 | Destabilizing | 0.871 | D | 0.529 | neutral | None | None | None | None | N |
L/N | 0.7741 | likely_pathogenic | 0.6773 | pathogenic | -2.271 | Highly Destabilizing | 0.999 | D | 0.795 | deleterious | None | None | None | None | N |
L/P | 0.9949 | likely_pathogenic | 0.9902 | pathogenic | -1.863 | Destabilizing | 0.999 | D | 0.793 | deleterious | None | None | None | None | N |
L/Q | 0.3163 | likely_benign | 0.2349 | benign | -2.282 | Highly Destabilizing | 0.996 | D | 0.763 | deleterious | None | None | None | None | N |
L/R | 0.4307 | ambiguous | 0.3338 | benign | -1.572 | Destabilizing | 0.996 | D | 0.766 | deleterious | None | None | None | None | N |
L/S | 0.5564 | ambiguous | 0.4336 | ambiguous | -2.948 | Highly Destabilizing | 0.994 | D | 0.723 | prob.delet. | N | 0.416893229 | None | None | N |
L/T | 0.3471 | ambiguous | 0.2393 | benign | -2.667 | Highly Destabilizing | 0.97 | D | 0.701 | prob.neutral | None | None | None | None | N |
L/V | 0.1268 | likely_benign | 0.0992 | benign | -1.863 | Destabilizing | 0.248 | N | 0.455 | neutral | N | 0.402905212 | None | None | N |
L/W | 0.3822 | ambiguous | 0.3652 | ambiguous | -1.931 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
L/Y | 0.4443 | ambiguous | 0.4132 | ambiguous | -1.743 | Destabilizing | 0.999 | D | 0.747 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.