Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31603 | 95032;95033;95034 | chr2:178546621;178546620;178546619 | chr2:179411348;179411347;179411346 |
N2AB | 29962 | 90109;90110;90111 | chr2:178546621;178546620;178546619 | chr2:179411348;179411347;179411346 |
N2A | 29035 | 87328;87329;87330 | chr2:178546621;178546620;178546619 | chr2:179411348;179411347;179411346 |
N2B | 22538 | 67837;67838;67839 | chr2:178546621;178546620;178546619 | chr2:179411348;179411347;179411346 |
Novex-1 | 22663 | 68212;68213;68214 | chr2:178546621;178546620;178546619 | chr2:179411348;179411347;179411346 |
Novex-2 | 22730 | 68413;68414;68415 | chr2:178546621;178546620;178546619 | chr2:179411348;179411347;179411346 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/F | rs1060500567 | None | 0.449 | N | 0.752 | 0.236 | 0.568892413138 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/F | rs1060500567 | None | 0.449 | N | 0.752 | 0.236 | 0.568892413138 | gnomAD-4.0.0 | 1.24184E-06 | None | None | None | None | N | None | 1.33579E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 8.49475E-07 | 0 | 0 |
V/I | None | None | 0.001 | N | 0.196 | 0.029 | 0.139678290688 | gnomAD-4.0.0 | 6.85721E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.16055E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6925 | likely_pathogenic | 0.672 | pathogenic | -1.734 | Destabilizing | 0.189 | N | 0.602 | neutral | N | 0.481457642 | None | None | N |
V/C | 0.9097 | likely_pathogenic | 0.8966 | pathogenic | -1.29 | Destabilizing | 0.962 | D | 0.741 | deleterious | None | None | None | None | N |
V/D | 0.9809 | likely_pathogenic | 0.9762 | pathogenic | -1.853 | Destabilizing | 0.623 | D | 0.814 | deleterious | N | 0.515414881 | None | None | N |
V/E | 0.9028 | likely_pathogenic | 0.8881 | pathogenic | -1.684 | Destabilizing | 0.687 | D | 0.784 | deleterious | None | None | None | None | N |
V/F | 0.5114 | ambiguous | 0.4914 | ambiguous | -1.064 | Destabilizing | 0.449 | N | 0.752 | deleterious | N | 0.514654412 | None | None | N |
V/G | 0.87 | likely_pathogenic | 0.8542 | pathogenic | -2.23 | Highly Destabilizing | 0.623 | D | 0.813 | deleterious | N | 0.515161391 | None | None | N |
V/H | 0.9622 | likely_pathogenic | 0.9525 | pathogenic | -1.88 | Destabilizing | 0.962 | D | 0.834 | deleterious | None | None | None | None | N |
V/I | 0.072 | likely_benign | 0.0706 | benign | -0.392 | Destabilizing | 0.001 | N | 0.196 | neutral | N | 0.43293733 | None | None | N |
V/K | 0.911 | likely_pathogenic | 0.8862 | pathogenic | -1.496 | Destabilizing | 0.687 | D | 0.792 | deleterious | None | None | None | None | N |
V/L | 0.3641 | ambiguous | 0.3351 | benign | -0.392 | Destabilizing | 0.016 | N | 0.453 | neutral | N | 0.465515753 | None | None | N |
V/M | 0.3287 | likely_benign | 0.3048 | benign | -0.372 | Destabilizing | 0.519 | D | 0.649 | prob.neutral | None | None | None | None | N |
V/N | 0.9347 | likely_pathogenic | 0.9157 | pathogenic | -1.676 | Destabilizing | 0.87 | D | 0.833 | deleterious | None | None | None | None | N |
V/P | 0.9903 | likely_pathogenic | 0.9873 | pathogenic | -0.808 | Destabilizing | 0.87 | D | 0.783 | deleterious | None | None | None | None | N |
V/Q | 0.872 | likely_pathogenic | 0.8495 | pathogenic | -1.572 | Destabilizing | 0.87 | D | 0.81 | deleterious | None | None | None | None | N |
V/R | 0.8733 | likely_pathogenic | 0.8441 | pathogenic | -1.277 | Destabilizing | 0.687 | D | 0.843 | deleterious | None | None | None | None | N |
V/S | 0.8676 | likely_pathogenic | 0.8475 | pathogenic | -2.316 | Highly Destabilizing | 0.687 | D | 0.765 | deleterious | None | None | None | None | N |
V/T | 0.6928 | likely_pathogenic | 0.6399 | pathogenic | -1.995 | Destabilizing | 0.236 | N | 0.647 | neutral | None | None | None | None | N |
V/W | 0.9783 | likely_pathogenic | 0.9735 | pathogenic | -1.482 | Destabilizing | 0.962 | D | 0.789 | deleterious | None | None | None | None | N |
V/Y | 0.9035 | likely_pathogenic | 0.8883 | pathogenic | -1.08 | Destabilizing | 0.687 | D | 0.739 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.