Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31646 | 95161;95162;95163 | chr2:178546395;178546394;178546393 | chr2:179411122;179411121;179411120 |
N2AB | 30005 | 90238;90239;90240 | chr2:178546395;178546394;178546393 | chr2:179411122;179411121;179411120 |
N2A | 29078 | 87457;87458;87459 | chr2:178546395;178546394;178546393 | chr2:179411122;179411121;179411120 |
N2B | 22581 | 67966;67967;67968 | chr2:178546395;178546394;178546393 | chr2:179411122;179411121;179411120 |
Novex-1 | 22706 | 68341;68342;68343 | chr2:178546395;178546394;178546393 | chr2:179411122;179411121;179411120 |
Novex-2 | 22773 | 68542;68543;68544 | chr2:178546395;178546394;178546393 | chr2:179411122;179411121;179411120 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | None | None | 0.543 | N | 0.33 | 0.286 | 0.280181792013 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3654 | ambiguous | 0.3418 | ambiguous | -0.109 | Destabilizing | 0.992 | D | 0.592 | neutral | None | None | None | None | I |
K/C | 0.7325 | likely_pathogenic | 0.7195 | pathogenic | -0.395 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | I |
K/D | 0.6471 | likely_pathogenic | 0.6367 | pathogenic | -0.121 | Destabilizing | 0.999 | D | 0.644 | neutral | None | None | None | None | I |
K/E | 0.2287 | likely_benign | 0.2041 | benign | -0.041 | Destabilizing | 0.994 | D | 0.57 | neutral | N | 0.420560758 | None | None | I |
K/F | 0.895 | likely_pathogenic | 0.8727 | pathogenic | 0.028 | Stabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | I |
K/G | 0.5421 | ambiguous | 0.5188 | ambiguous | -0.397 | Destabilizing | 0.996 | D | 0.58 | neutral | None | None | None | None | I |
K/H | 0.3642 | ambiguous | 0.3519 | ambiguous | -0.587 | Destabilizing | 1.0 | D | 0.675 | neutral | None | None | None | None | I |
K/I | 0.5004 | ambiguous | 0.4589 | ambiguous | 0.606 | Stabilizing | 0.997 | D | 0.715 | prob.delet. | N | 0.492733074 | None | None | I |
K/L | 0.4811 | ambiguous | 0.4596 | ambiguous | 0.606 | Stabilizing | 0.992 | D | 0.579 | neutral | None | None | None | None | I |
K/M | 0.3363 | likely_benign | 0.3091 | benign | 0.081 | Stabilizing | 1.0 | D | 0.675 | neutral | None | None | None | None | I |
K/N | 0.5273 | ambiguous | 0.5057 | ambiguous | -0.207 | Destabilizing | 0.998 | D | 0.625 | neutral | N | 0.50873989 | None | None | I |
K/P | 0.9519 | likely_pathogenic | 0.9402 | pathogenic | 0.397 | Stabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | I |
K/Q | 0.1457 | likely_benign | 0.1376 | benign | -0.214 | Destabilizing | 0.999 | D | 0.657 | neutral | N | 0.495309233 | None | None | I |
K/R | 0.0879 | likely_benign | 0.0855 | benign | -0.305 | Destabilizing | 0.994 | D | 0.57 | neutral | N | 0.493482436 | None | None | I |
K/S | 0.4641 | ambiguous | 0.4413 | ambiguous | -0.63 | Destabilizing | 0.983 | D | 0.56 | neutral | None | None | None | None | I |
K/T | 0.1968 | likely_benign | 0.1801 | benign | -0.374 | Destabilizing | 0.543 | D | 0.33 | neutral | N | 0.413058782 | None | None | I |
K/V | 0.3615 | ambiguous | 0.3286 | benign | 0.397 | Stabilizing | 0.992 | D | 0.578 | neutral | None | None | None | None | I |
K/W | 0.8736 | likely_pathogenic | 0.8531 | pathogenic | -0.017 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | I |
K/Y | 0.7745 | likely_pathogenic | 0.7418 | pathogenic | 0.298 | Stabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.