Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31652 | 95179;95180;95181 | chr2:178546377;178546376;178546375 | chr2:179411104;179411103;179411102 |
N2AB | 30011 | 90256;90257;90258 | chr2:178546377;178546376;178546375 | chr2:179411104;179411103;179411102 |
N2A | 29084 | 87475;87476;87477 | chr2:178546377;178546376;178546375 | chr2:179411104;179411103;179411102 |
N2B | 22587 | 67984;67985;67986 | chr2:178546377;178546376;178546375 | chr2:179411104;179411103;179411102 |
Novex-1 | 22712 | 68359;68360;68361 | chr2:178546377;178546376;178546375 | chr2:179411104;179411103;179411102 |
Novex-2 | 22779 | 68560;68561;68562 | chr2:178546377;178546376;178546375 | chr2:179411104;179411103;179411102 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | None | None | 1.0 | N | 0.649 | 0.51 | 0.298403945805 | gnomAD-4.0.0 | 1.59128E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85842E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.191 | likely_benign | 0.1929 | benign | -0.368 | Destabilizing | 1.0 | D | 0.563 | neutral | N | 0.448514497 | None | None | N |
G/C | 0.3185 | likely_benign | 0.3202 | benign | -0.829 | Destabilizing | 1.0 | D | 0.641 | neutral | None | None | None | None | N |
G/D | 0.1415 | likely_benign | 0.1364 | benign | -0.549 | Destabilizing | 1.0 | D | 0.655 | neutral | None | None | None | None | N |
G/E | 0.2277 | likely_benign | 0.2157 | benign | -0.7 | Destabilizing | 1.0 | D | 0.664 | neutral | N | 0.423232051 | None | None | N |
G/F | 0.7728 | likely_pathogenic | 0.7742 | pathogenic | -1.059 | Destabilizing | 1.0 | D | 0.619 | neutral | None | None | None | None | N |
G/H | 0.55 | ambiguous | 0.5583 | ambiguous | -0.745 | Destabilizing | 1.0 | D | 0.629 | neutral | None | None | None | None | N |
G/I | 0.6553 | likely_pathogenic | 0.6609 | pathogenic | -0.403 | Destabilizing | 1.0 | D | 0.629 | neutral | None | None | None | None | N |
G/K | 0.6138 | likely_pathogenic | 0.6066 | pathogenic | -0.833 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | N |
G/L | 0.6087 | likely_pathogenic | 0.6161 | pathogenic | -0.403 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | N |
G/M | 0.6297 | likely_pathogenic | 0.6315 | pathogenic | -0.361 | Destabilizing | 1.0 | D | 0.635 | neutral | None | None | None | None | N |
G/N | 0.196 | likely_benign | 0.2029 | benign | -0.439 | Destabilizing | 1.0 | D | 0.603 | neutral | None | None | None | None | N |
G/P | 0.971 | likely_pathogenic | 0.9734 | pathogenic | -0.355 | Destabilizing | 1.0 | D | 0.652 | neutral | None | None | None | None | N |
G/Q | 0.4401 | ambiguous | 0.4352 | ambiguous | -0.725 | Destabilizing | 1.0 | D | 0.655 | neutral | None | None | None | None | N |
G/R | 0.5201 | ambiguous | 0.5092 | ambiguous | -0.43 | Destabilizing | 1.0 | D | 0.649 | neutral | N | 0.462163802 | None | None | N |
G/S | 0.1531 | likely_benign | 0.1533 | benign | -0.624 | Destabilizing | 1.0 | D | 0.601 | neutral | None | None | None | None | N |
G/T | 0.3723 | ambiguous | 0.384 | ambiguous | -0.702 | Destabilizing | 1.0 | D | 0.664 | neutral | None | None | None | None | N |
G/V | 0.4724 | ambiguous | 0.4718 | ambiguous | -0.355 | Destabilizing | 1.0 | D | 0.663 | neutral | N | 0.469140486 | None | None | N |
G/W | 0.5715 | likely_pathogenic | 0.5754 | pathogenic | -1.242 | Destabilizing | 1.0 | D | 0.636 | neutral | None | None | None | None | N |
G/Y | 0.5341 | ambiguous | 0.5369 | ambiguous | -0.871 | Destabilizing | 1.0 | D | 0.618 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.