Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31675 | 95248;95249;95250 | chr2:178546308;178546307;178546306 | chr2:179411035;179411034;179411033 |
N2AB | 30034 | 90325;90326;90327 | chr2:178546308;178546307;178546306 | chr2:179411035;179411034;179411033 |
N2A | 29107 | 87544;87545;87546 | chr2:178546308;178546307;178546306 | chr2:179411035;179411034;179411033 |
N2B | 22610 | 68053;68054;68055 | chr2:178546308;178546307;178546306 | chr2:179411035;179411034;179411033 |
Novex-1 | 22735 | 68428;68429;68430 | chr2:178546308;178546307;178546306 | chr2:179411035;179411034;179411033 |
Novex-2 | 22802 | 68629;68630;68631 | chr2:178546308;178546307;178546306 | chr2:179411035;179411034;179411033 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.939 | D | 0.749 | 0.853 | 0.837465136938 | gnomAD-4.0.0 | 1.59123E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85832E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.954 | likely_pathogenic | 0.9662 | pathogenic | -3.045 | Highly Destabilizing | 0.91 | D | 0.667 | neutral | None | None | None | None | N |
I/C | 0.9213 | likely_pathogenic | 0.9353 | pathogenic | -2.501 | Highly Destabilizing | 0.999 | D | 0.738 | prob.delet. | None | None | None | None | N |
I/D | 0.9972 | likely_pathogenic | 0.9976 | pathogenic | -3.555 | Highly Destabilizing | 0.998 | D | 0.854 | deleterious | None | None | None | None | N |
I/E | 0.9899 | likely_pathogenic | 0.9902 | pathogenic | -3.322 | Highly Destabilizing | 0.993 | D | 0.854 | deleterious | None | None | None | None | N |
I/F | 0.4797 | ambiguous | 0.5134 | ambiguous | -1.911 | Destabilizing | 0.991 | D | 0.72 | prob.delet. | D | 0.590597856 | None | None | N |
I/G | 0.9902 | likely_pathogenic | 0.9921 | pathogenic | -3.612 | Highly Destabilizing | 0.993 | D | 0.855 | deleterious | None | None | None | None | N |
I/H | 0.971 | likely_pathogenic | 0.9728 | pathogenic | -3.024 | Highly Destabilizing | 0.999 | D | 0.83 | deleterious | None | None | None | None | N |
I/K | 0.9665 | likely_pathogenic | 0.9647 | pathogenic | -2.594 | Highly Destabilizing | 0.993 | D | 0.853 | deleterious | None | None | None | None | N |
I/L | 0.2436 | likely_benign | 0.2542 | benign | -1.388 | Destabilizing | 0.58 | D | 0.447 | neutral | D | 0.579302666 | None | None | N |
I/M | 0.2959 | likely_benign | 0.3218 | benign | -1.339 | Destabilizing | 0.991 | D | 0.685 | prob.neutral | D | 0.619446994 | None | None | N |
I/N | 0.9439 | likely_pathogenic | 0.9497 | pathogenic | -2.99 | Highly Destabilizing | 0.997 | D | 0.856 | deleterious | D | 0.620859624 | None | None | N |
I/P | 0.9959 | likely_pathogenic | 0.9967 | pathogenic | -1.924 | Destabilizing | 0.998 | D | 0.847 | deleterious | None | None | None | None | N |
I/Q | 0.9672 | likely_pathogenic | 0.9666 | pathogenic | -2.847 | Highly Destabilizing | 0.998 | D | 0.862 | deleterious | None | None | None | None | N |
I/R | 0.9491 | likely_pathogenic | 0.9484 | pathogenic | -2.185 | Highly Destabilizing | 0.998 | D | 0.861 | deleterious | None | None | None | None | N |
I/S | 0.9499 | likely_pathogenic | 0.9595 | pathogenic | -3.689 | Highly Destabilizing | 0.991 | D | 0.839 | deleterious | D | 0.620859624 | None | None | N |
I/T | 0.9378 | likely_pathogenic | 0.9536 | pathogenic | -3.307 | Highly Destabilizing | 0.939 | D | 0.749 | deleterious | D | 0.620456015 | None | None | N |
I/V | 0.1208 | likely_benign | 0.1452 | benign | -1.924 | Destabilizing | 0.02 | N | 0.249 | neutral | D | 0.572148192 | None | None | N |
I/W | 0.9617 | likely_pathogenic | 0.966 | pathogenic | -2.332 | Highly Destabilizing | 0.999 | D | 0.821 | deleterious | None | None | None | None | N |
I/Y | 0.9116 | likely_pathogenic | 0.913 | pathogenic | -2.113 | Highly Destabilizing | 0.998 | D | 0.745 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.