Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31687 | 95284;95285;95286 | chr2:178546272;178546271;178546270 | chr2:179410999;179410998;179410997 |
N2AB | 30046 | 90361;90362;90363 | chr2:178546272;178546271;178546270 | chr2:179410999;179410998;179410997 |
N2A | 29119 | 87580;87581;87582 | chr2:178546272;178546271;178546270 | chr2:179410999;179410998;179410997 |
N2B | 22622 | 68089;68090;68091 | chr2:178546272;178546271;178546270 | chr2:179410999;179410998;179410997 |
Novex-1 | 22747 | 68464;68465;68466 | chr2:178546272;178546271;178546270 | chr2:179410999;179410998;179410997 |
Novex-2 | 22814 | 68665;68666;68667 | chr2:178546272;178546271;178546270 | chr2:179410999;179410998;179410997 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1471246687 | -0.183 | 0.061 | N | 0.275 | 0.192 | 0.286848849266 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/I | rs1471246687 | -0.183 | 0.061 | N | 0.275 | 0.192 | 0.286848849266 | gnomAD-4.0.0 | 2.73694E-06 | None | None | None | None | N | None | 0 | 2.23614E-05 | None | 0 | 0 | None | 0 | 0 | 2.69854E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1069 | likely_benign | 0.1057 | benign | -1.163 | Destabilizing | 0.826 | D | 0.464 | neutral | N | 0.465597297 | None | None | N |
T/C | 0.3094 | likely_benign | 0.2981 | benign | -0.836 | Destabilizing | 0.1 | N | 0.385 | neutral | None | None | None | None | N |
T/D | 0.5747 | likely_pathogenic | 0.5891 | pathogenic | -1.173 | Destabilizing | 0.997 | D | 0.571 | neutral | None | None | None | None | N |
T/E | 0.3961 | ambiguous | 0.4024 | ambiguous | -1.018 | Destabilizing | 0.997 | D | 0.565 | neutral | None | None | None | None | N |
T/F | 0.2446 | likely_benign | 0.2394 | benign | -0.996 | Destabilizing | 0.991 | D | 0.587 | neutral | None | None | None | None | N |
T/G | 0.319 | likely_benign | 0.3199 | benign | -1.544 | Destabilizing | 0.969 | D | 0.551 | neutral | None | None | None | None | N |
T/H | 0.2571 | likely_benign | 0.2561 | benign | -1.739 | Destabilizing | 0.999 | D | 0.597 | neutral | None | None | None | None | N |
T/I | 0.1073 | likely_benign | 0.1077 | benign | -0.184 | Destabilizing | 0.061 | N | 0.275 | neutral | N | 0.479530838 | None | None | N |
T/K | 0.2821 | likely_benign | 0.2879 | benign | -0.494 | Destabilizing | 0.997 | D | 0.566 | neutral | None | None | None | None | N |
T/L | 0.0954 | likely_benign | 0.0942 | benign | -0.184 | Destabilizing | 0.759 | D | 0.456 | neutral | None | None | None | None | N |
T/M | 0.085 | likely_benign | 0.0837 | benign | -0.084 | Destabilizing | 0.991 | D | 0.582 | neutral | None | None | None | None | N |
T/N | 0.1758 | likely_benign | 0.1796 | benign | -1.018 | Destabilizing | 0.996 | D | 0.548 | neutral | N | 0.478132144 | None | None | N |
T/P | 0.875 | likely_pathogenic | 0.8799 | pathogenic | -0.479 | Destabilizing | 0.996 | D | 0.571 | neutral | N | 0.501098245 | None | None | N |
T/Q | 0.2386 | likely_benign | 0.2421 | benign | -0.925 | Destabilizing | 0.997 | D | 0.589 | neutral | None | None | None | None | N |
T/R | 0.2037 | likely_benign | 0.2024 | benign | -0.613 | Destabilizing | 0.997 | D | 0.574 | neutral | None | None | None | None | N |
T/S | 0.1298 | likely_benign | 0.1273 | benign | -1.283 | Destabilizing | 0.959 | D | 0.525 | neutral | N | 0.453787031 | None | None | N |
T/V | 0.0979 | likely_benign | 0.0958 | benign | -0.479 | Destabilizing | 0.079 | N | 0.171 | neutral | None | None | None | None | N |
T/W | 0.6097 | likely_pathogenic | 0.6064 | pathogenic | -1.054 | Destabilizing | 0.999 | D | 0.627 | neutral | None | None | None | None | N |
T/Y | 0.2835 | likely_benign | 0.2798 | benign | -0.701 | Destabilizing | 0.997 | D | 0.593 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.