Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31719 | 95380;95381;95382 | chr2:178546081;178546080;178546079 | chr2:179410808;179410807;179410806 |
N2AB | 30078 | 90457;90458;90459 | chr2:178546081;178546080;178546079 | chr2:179410808;179410807;179410806 |
N2A | 29151 | 87676;87677;87678 | chr2:178546081;178546080;178546079 | chr2:179410808;179410807;179410806 |
N2B | 22654 | 68185;68186;68187 | chr2:178546081;178546080;178546079 | chr2:179410808;179410807;179410806 |
Novex-1 | 22779 | 68560;68561;68562 | chr2:178546081;178546080;178546079 | chr2:179410808;179410807;179410806 |
Novex-2 | 22846 | 68761;68762;68763 | chr2:178546081;178546080;178546079 | chr2:179410808;179410807;179410806 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | None | None | 0.997 | N | 0.538 | 0.307 | 0.29385284311 | gnomAD-4.0.0 | 1.5955E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86781E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.4426 | ambiguous | 0.5376 | ambiguous | -0.064 | Destabilizing | 0.999 | D | 0.618 | neutral | None | None | None | None | N |
R/C | 0.3055 | likely_benign | 0.3659 | ambiguous | -0.244 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
R/D | 0.6437 | likely_pathogenic | 0.717 | pathogenic | -0.065 | Destabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | N |
R/E | 0.4735 | ambiguous | 0.5411 | ambiguous | -0.012 | Destabilizing | 0.999 | D | 0.672 | neutral | None | None | None | None | N |
R/F | 0.6952 | likely_pathogenic | 0.7741 | pathogenic | -0.332 | Destabilizing | 1.0 | D | 0.69 | prob.neutral | None | None | None | None | N |
R/G | 0.2456 | likely_benign | 0.3141 | benign | -0.24 | Destabilizing | 1.0 | D | 0.599 | neutral | N | 0.368080562 | None | None | N |
R/H | 0.1396 | likely_benign | 0.1624 | benign | -0.641 | Destabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | N |
R/I | 0.5482 | ambiguous | 0.6268 | pathogenic | 0.358 | Stabilizing | 1.0 | D | 0.704 | prob.neutral | N | 0.496143447 | None | None | N |
R/K | 0.152 | likely_benign | 0.1711 | benign | -0.117 | Destabilizing | 0.997 | D | 0.538 | neutral | N | 0.441500885 | None | None | N |
R/L | 0.3879 | ambiguous | 0.4667 | ambiguous | 0.358 | Stabilizing | 1.0 | D | 0.599 | neutral | None | None | None | None | N |
R/M | 0.4299 | ambiguous | 0.5021 | ambiguous | -0.01 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | N |
R/N | 0.5442 | ambiguous | 0.6166 | pathogenic | 0.093 | Stabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
R/P | 0.8154 | likely_pathogenic | 0.8836 | pathogenic | 0.237 | Stabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | N |
R/Q | 0.1487 | likely_benign | 0.1718 | benign | -0.026 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
R/S | 0.4893 | ambiguous | 0.5802 | pathogenic | -0.285 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | N | 0.407790957 | None | None | N |
R/T | 0.3555 | ambiguous | 0.4364 | ambiguous | -0.104 | Destabilizing | 1.0 | D | 0.665 | neutral | N | 0.467359335 | None | None | N |
R/V | 0.5561 | ambiguous | 0.6482 | pathogenic | 0.237 | Stabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
R/W | 0.299 | likely_benign | 0.3781 | ambiguous | -0.389 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
R/Y | 0.5185 | ambiguous | 0.5928 | pathogenic | 0.022 | Stabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.