Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3173 | 9742;9743;9744 | chr2:178766567;178766566;178766565 | chr2:179631294;179631293;179631292 |
N2AB | 3173 | 9742;9743;9744 | chr2:178766567;178766566;178766565 | chr2:179631294;179631293;179631292 |
N2A | 3173 | 9742;9743;9744 | chr2:178766567;178766566;178766565 | chr2:179631294;179631293;179631292 |
N2B | 3127 | 9604;9605;9606 | chr2:178766567;178766566;178766565 | chr2:179631294;179631293;179631292 |
Novex-1 | 3127 | 9604;9605;9606 | chr2:178766567;178766566;178766565 | chr2:179631294;179631293;179631292 |
Novex-2 | 3127 | 9604;9605;9606 | chr2:178766567;178766566;178766565 | chr2:179631294;179631293;179631292 |
Novex-3 | 3173 | 9742;9743;9744 | chr2:178766567;178766566;178766565 | chr2:179631294;179631293;179631292 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs151129843 | None | 0.092 | N | 0.359 | 0.068 | 0.0297737177859 | gnomAD-4.0.0 | 5.47288E-06 | None | None | None | None | N | None | 2.98686E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99308E-07 | 0 | 9.93608E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.7635 | likely_pathogenic | 0.6734 | pathogenic | -0.252 | Destabilizing | 0.957 | D | 0.689 | prob.neutral | N | 0.328188656 | None | None | N |
D/C | 0.9889 | likely_pathogenic | 0.9844 | pathogenic | 0.011 | Stabilizing | 0.999 | D | 0.743 | deleterious | None | None | None | None | N |
D/E | 0.5847 | likely_pathogenic | 0.454 | ambiguous | -0.437 | Destabilizing | 0.092 | N | 0.359 | neutral | N | 0.348350273 | None | None | N |
D/F | 0.9659 | likely_pathogenic | 0.9615 | pathogenic | -0.238 | Destabilizing | 0.999 | D | 0.765 | deleterious | None | None | None | None | N |
D/G | 0.7706 | likely_pathogenic | 0.7193 | pathogenic | -0.468 | Destabilizing | 0.928 | D | 0.698 | prob.neutral | N | 0.39227628 | None | None | N |
D/H | 0.9284 | likely_pathogenic | 0.9048 | pathogenic | -0.249 | Destabilizing | 0.997 | D | 0.743 | deleterious | N | 0.356999686 | None | None | N |
D/I | 0.9263 | likely_pathogenic | 0.9139 | pathogenic | 0.274 | Stabilizing | 0.992 | D | 0.777 | deleterious | None | None | None | None | N |
D/K | 0.9355 | likely_pathogenic | 0.9157 | pathogenic | 0.118 | Stabilizing | 0.968 | D | 0.689 | prob.neutral | None | None | None | None | N |
D/L | 0.9064 | likely_pathogenic | 0.877 | pathogenic | 0.274 | Stabilizing | 0.983 | D | 0.751 | deleterious | None | None | None | None | N |
D/M | 0.9631 | likely_pathogenic | 0.9582 | pathogenic | 0.428 | Stabilizing | 0.999 | D | 0.752 | deleterious | None | None | None | None | N |
D/N | 0.5053 | ambiguous | 0.4232 | ambiguous | -0.087 | Destabilizing | 0.978 | D | 0.742 | deleterious | N | 0.39227628 | None | None | N |
D/P | 0.9662 | likely_pathogenic | 0.9183 | pathogenic | 0.122 | Stabilizing | 0.992 | D | 0.744 | deleterious | None | None | None | None | N |
D/Q | 0.9346 | likely_pathogenic | 0.9093 | pathogenic | -0.063 | Destabilizing | 0.968 | D | 0.783 | deleterious | None | None | None | None | N |
D/R | 0.9484 | likely_pathogenic | 0.9312 | pathogenic | 0.259 | Stabilizing | 0.983 | D | 0.769 | deleterious | None | None | None | None | N |
D/S | 0.6774 | likely_pathogenic | 0.5859 | pathogenic | -0.22 | Destabilizing | 0.895 | D | 0.719 | prob.delet. | None | None | None | None | N |
D/T | 0.8466 | likely_pathogenic | 0.8054 | pathogenic | -0.062 | Destabilizing | 0.983 | D | 0.733 | prob.delet. | None | None | None | None | N |
D/V | 0.8197 | likely_pathogenic | 0.7839 | pathogenic | 0.122 | Stabilizing | 0.978 | D | 0.75 | deleterious | N | 0.356713365 | None | None | N |
D/W | 0.9905 | likely_pathogenic | 0.99 | pathogenic | -0.145 | Destabilizing | 0.999 | D | 0.749 | deleterious | None | None | None | None | N |
D/Y | 0.8159 | likely_pathogenic | 0.786 | pathogenic | -0.018 | Destabilizing | 0.999 | D | 0.765 | deleterious | N | 0.393404294 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.